RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SLC7A3Q8WY07 619 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 MTMR8Q96EF0 704 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 DHRS1Q96LJ7 313 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 MYRFLQ96LU7 910 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 SLC6A18Q96N87 628 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 FMNL2Q96PY5 1086 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 DBNDD2Q9BQY9 259 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 CARD10Q9BWT7 1032 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 C7orf69Q9H7B7 122 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 FAM86C1Q9NVL1 165 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 SLC5A4Q9NY91 659 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 COMMD10Q9Y6G5 202 aa5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 OAS3Q9Y6K5 1087 aaKnown RBP5.15□□□□□ -1.59
SFSWAP-211ENST00000542813 FAM83GA6ND36 823 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 MYL1P05976 194 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 EPHX1P07099 455 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 FGFR1P11362 822 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 SPINK2P20155 84 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 MAOBP27338 520 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 ARL4DP49703 201 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 ITKQ08881 620 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 PIN1Q13526 163 aaPredicted RBP5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 PDE3AQ14432 1141 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 HLTFQ14527 1009 aaKnown RBP eCLIP5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 TRIM61Q5EBN2 209 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 RNF219Q5W0B1 726 aaPredicted RBP5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 C14orf80Q86SX3 495 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 PPFIBP1Q86W92 1011 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 ZNF227Q86WZ6 799 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 FAM13CQ8NE31 585 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 PPP1R14AQ96A00 147 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 ACSF2Q96CM8 615 aaPredicted RBP5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 HAUS7Q99871 368 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 ARNT2Q9HBZ2 717 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 SUCOQ9UBS9 1254 aaKnown RBP5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 SUSD2Q9UGT4 822 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 PHLDB1Q86UU1 1377 aa5.14□□□□□ -1.59
SFSWAP-211ENST00000542813 E2F8A0AVK6 867 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 HMX2A2RU54 273 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 GPR39O43194 453 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PRODHO43272 600 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 ZNF862O60290 1169 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 BRINP1O60477 761 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 ADAM11O75078 769 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 TP53P04637 393 aaPredicted RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 ITGAVP06756 1048 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PABPC1P11940 636 aaKnown RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 TAL1P17542 331 aaPredicted RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 NEK4P51957 841 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 YARSP54577 528 aaKnown RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 ETF1P62495 437 aaKnown RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PIP4K2BP78356 416 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 C19orf57Q0VDD7 668 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 STAT4Q14765 748 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 DHCR24Q15392 516 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 TDRD10Q5VZ19 366 aaKnown RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 HEATR6Q6AI08 1181 aaKnown RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PPP4R4Q6NUP7 873 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PKN3Q6P5Z2 889 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 NSMFQ6X4W1 530 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 LHFPL2Q6ZUX7 228 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 BRAPQ7Z569 592 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 C12orf40Q86WS4 652 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 SPATS2Q86XZ4 545 aaKnown RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 CLEC10AQ8IUN9 316 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 FAM20CQ8IXL6 584 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 TMEM192Q8IY95 271 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PHACTR4Q8IZ21 702 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 LRRN4CLQ8ND94 238 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 TTC8Q8TAM2 541 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 UBASH3BQ8TF42 649 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 WNT8BQ93098 351 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 MPHOSPH6Q99547 160 aaKnown RBP5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 NRSN2Q9GZP1 204 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 CDH19Q9H159 772 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 TRIM39Q9HCM9 518 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 AASDHPPTQ9NRN7 309 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 NDOR1Q9UHB4 597 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 CSADQ9Y600 493 aa5.13□□□□□ -1.59
SFSWAP-211ENST00000542813 PRR19A6NJB7 356 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 DDX3YO15523 660 aaKnown RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 SART1O43290 800 aaKnown RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 OPA1O60313 960 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 NPTXRO95502 500 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 LIG1P18858 919 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 POU3F2P20265 443 aaPredicted RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 SAFB2Q14151 953 aaKnown RBP eCLIP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 BRD3Q15059 726 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 PCBP1Q15365 356 aaKnown RBP eCLIP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 KIF4BQ2VIQ3 1234 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 C4orf46Q504U0 113 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 SYCP2LQ5T4T6 812 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 ANKRD34AQ69YU3 496 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 APBB1IPQ7Z5R6 666 aaPredicted RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 ZBTB46Q86UZ6 589 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 DTX1Q86Y01 620 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 PASD1Q8IV76 773 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 SLFN12Q8IYM2 578 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 SAMD3Q8N6K7 520 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms