RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 CHMP4CQ96CF2 233 aa19.44■□□□□ 0.7
CCND1-205ENST00000542367 MAML3Q96JK9 1138 aa19.44■□□□□ 0.7
CCND1-205ENST00000542367 TEX13BQ9BXU2 312 aa19.44■□□□□ 0.7
CCND1-205ENST00000542367 C11orf49Q9H6J7 331 aa19.44■□□□□ 0.7
CCND1-205ENST00000542367 TOMM22Q9NS69 142 aa19.44■□□□□ 0.7
CCND1-205ENST00000542367 COLQQ9Y215 455 aaPredicted RBP19.44■□□□□ 0.7
CCND1-205ENST00000542367 RIPK3Q9Y572 518 aa19.44■□□□□ 0.7
CCND1-205ENST00000542367 CTDP1Q9Y5B0 961 aaPredicted RBP19.44■□□□□ 0.7
CCND1-205ENST00000542367 PGK2P07205 417 aa19.43■□□□□ 0.7
CCND1-205ENST00000542367 SLC4A3P48751 1232 aa19.43■□□□□ 0.7
CCND1-205ENST00000542367 MFAP1P55081 439 aaKnown RBP19.43■□□□□ 0.7
CCND1-205ENST00000542367 HAND2P61296 217 aa19.43■□□□□ 0.7
CCND1-205ENST00000542367 KCTD2Q14681 263 aa19.43■□□□□ 0.7
CCND1-205ENST00000542367 RRP12Q5JTH9 1297 aaKnown RBP19.43■□□□□ 0.7
CCND1-205ENST00000542367 HABP4Q5JVS0 413 aaKnown RBP19.43■□□□□ 0.7
CCND1-205ENST00000542367 SNRNP48Q6IEG0 339 aaKnown RBP19.43■□□□□ 0.7
CCND1-205ENST00000542367 DDX20Q9UHI6 824 aaKnown RBP19.43■□□□□ 0.7
CCND1-205ENST00000542367 ISY1Q9ULR0 285 aaKnown RBP19.43■□□□□ 0.7
CCND1-205ENST00000542367 ZMYM6O95789 1325 aa19.43■□□□□ 0.7
CCND1-205ENST00000542367 TMEM232C9JQI7 657 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 SLC34A2O95436 690 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 CYBAP13498 195 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 MCCP23508 829 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 PDE4AP27815 886 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 PRAMEF19Q5SWL8 479 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 GMCL1Q96IK5 515 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 SLC38A10Q9HBR0 1119 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 RAVER2Q9HCJ3 691 aaKnown RBP19.42■□□□□ 0.7
CCND1-205ENST00000542367 DIAPH3Q9NSV4 1193 aa19.42■□□□□ 0.7
CCND1-205ENST00000542367 HIP1O00291 1037 aa19.41■□□□□ 0.7
CCND1-205ENST00000542367 ATP2A1O14983 1001 aa19.41■□□□□ 0.7
CCND1-205ENST00000542367 MSCO60682 206 aa19.41■□□□□ 0.7
CCND1-205ENST00000542367 SLC1A4P43007 532 aa19.41■□□□□ 0.7
CCND1-205ENST00000542367 NOVP48745 357 aa19.41■□□□□ 0.7
CCND1-205ENST00000542367 ZNF792Q3KQV3 632 aa19.41■□□□□ 0.7
CCND1-205ENST00000542367 CHURC1Q8WUH1 139 aa19.41■□□□□ 0.7
CCND1-205ENST00000542367 DIS3Q9Y2L1 958 aaKnown RBP19.41■□□□□ 0.7
CCND1-205ENST00000542367 STAT2P52630 851 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 IKQ13123 557 aaPredicted RBP19.4■□□□□ 0.7
CCND1-205ENST00000542367 AKNAD1Q5T1N1 836 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 CHRDL2Q6WN34 429 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 MFSD6Q6ZSS7 791 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 KCTD1Q719H9 257 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 STAG1Q8WVM7 1258 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 MTMR7Q9Y216 660 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 PFASO15067 1338 aa19.4■□□□□ 0.7
CCND1-205ENST00000542367 ALPK3Q96L96 1907 aa19.39■□□□□ 0.7
CCND1-205ENST00000542367 FDX1P10109 184 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 COL6A1P12109 1028 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 ANO1Q5XXA6 986 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 FAM160B2Q86V87 743 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 DDX11Q96FC9 970 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 TINF2Q9BSI4 451 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 TCP11L1Q9NUJ3 509 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 CEP290O15078 2479 aa19.39■□□□□ 0.69
CCND1-205ENST00000542367 ZNF213O14771 459 aa19.38■□□□□ 0.69
CCND1-205ENST00000542367 SEPT4O43236 478 aa19.38■□□□□ 0.69
CCND1-205ENST00000542367 PLA2G6O60733 806 aa19.38■□□□□ 0.69
CCND1-205ENST00000542367 PCP11498 1178 aaKnown RBP19.38■□□□□ 0.69
CCND1-205ENST00000542367 OAZ1P54368 228 aa19.38■□□□□ 0.69
CCND1-205ENST00000542367 RASGRP2Q7LDG7 609 aa19.38■□□□□ 0.69
CCND1-205ENST00000542367 TBC1D10CQ8IV04 446 aa19.38■□□□□ 0.69
CCND1-205ENST00000542367 C7orf61Q8IZ16 206 aa19.38■□□□□ 0.69
CCND1-205ENST00000542367 PLXNA1Q9UIW2 1896 aa19.37■□□□□ 0.69
CCND1-205ENST00000542367 FRMPD3Q5JV73 1810 aa19.37■□□□□ 0.69
CCND1-205ENST00000542367 GSPT1P15170 499 aaKnown RBP19.37■□□□□ 0.69
CCND1-205ENST00000542367 TTC22Q5TAA0 569 aa19.37■□□□□ 0.69
CCND1-205ENST00000542367 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
CCND1-205ENST00000542367 RNF41Q9H4P4 317 aaPredicted RBP19.37■□□□□ 0.69
CCND1-205ENST00000542367 DNAJC25-GNG10A0A024R161 153 aa19.36■□□□□ 0.69
CCND1-205ENST00000542367 TOP1P11387 765 aaKnown RBP19.36■□□□□ 0.69
CCND1-205ENST00000542367 GJC2Q5T442 439 aaPredicted RBP19.36■□□□□ 0.69
CCND1-205ENST00000542367 ANKRD35Q8N283 1001 aa19.36■□□□□ 0.69
CCND1-205ENST00000542367 ARRDC4Q8NCT1 418 aa19.36■□□□□ 0.69
CCND1-205ENST00000542367 CHST13Q8NET6 341 aa19.36■□□□□ 0.69
CCND1-205ENST00000542367 SENP6Q9GZR1 1112 aaPredicted RBP19.36■□□□□ 0.69
CCND1-205ENST00000542367 FBXO40Q9UH90 709 aa19.36■□□□□ 0.69
CCND1-205ENST00000542367 NRBP1Q9UHY1 535 aa19.36■□□□□ 0.69
CCND1-205ENST00000542367 ZNF536O15090 1300 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 DNM1LO00429 736 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 SNAP25P60880 206 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 CCDC96Q2M329 555 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCND1-205ENST00000542367 DCAF4Q8WV16 495 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 AGBL1Q96MI9 1066 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 TTC14Q96N46 770 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 DSCC1Q9BVC3 393 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 RBM27Q9P2N5 1060 aaKnown RBP19.35■□□□□ 0.69
CCND1-205ENST00000542367 PRR12Q9ULL5 1215 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 SMCHD1A6NHR9 2005 aa19.35■□□□□ 0.69
CCND1-205ENST00000542367 NEDD4P46934 1319 aa19.34■□□□□ 0.69
CCND1-205ENST00000542367 TAL1P17542 331 aaPredicted RBP19.34■□□□□ 0.69
CCND1-205ENST00000542367 LRRC26Q2I0M4 334 aa19.34■□□□□ 0.69
CCND1-205ENST00000542367 TTBK2Q6IQ55 1244 aa19.34■□□□□ 0.69
CCND1-205ENST00000542367 CCDC174Q6PII3 467 aa19.34■□□□□ 0.69
CCND1-205ENST00000542367 MSL3Q8N5Y2 521 aaKnown RBP19.34■□□□□ 0.69
CCND1-205ENST00000542367 ESR2Q92731 530 aa19.34■□□□□ 0.69
CCND1-205ENST00000542367 ZKSCAN3Q9BRR0 538 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms