RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SNRNP48Q6IEG0 339 aaKnown RBP18.56■□□□□ 0.56
VPS33A-206ENST00000542310 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 LRRC47Q8N1G4 583 aaKnown RBP18.56■□□□□ 0.56
VPS33A-206ENST00000542310 ARRDC4Q8NCT1 418 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 GMCL1Q96IK5 515 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 SLC38A10Q9HBR0 1119 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 ZMYND8Q9ULU4 1186 aaPredicted RBP18.56■□□□□ 0.56
VPS33A-206ENST00000542310 DNAH12Q6ZR08 3092 aa18.56■□□□□ 0.56
VPS33A-206ENST00000542310 ZBED4O75132 1171 aa18.55■□□□□ 0.56
VPS33A-206ENST00000542310 TFAP4Q01664 338 aa18.55■□□□□ 0.56
VPS33A-206ENST00000542310 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
VPS33A-206ENST00000542310 TINF2Q9BSI4 451 aa18.55■□□□□ 0.56
VPS33A-206ENST00000542310 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
VPS33A-206ENST00000542310 SYNGAP1Q96PV0 1343 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 KBTBD13C9JR72 458 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 ORC4O43929 436 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 BMP3P12645 472 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 STAT2P52630 851 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 MCMDC2Q4G0Z9 681 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 FAM47AQ5JRC9 791 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 SLFN13Q68D06 897 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 SENP6Q9GZR1 1112 aaPredicted RBP18.54■□□□□ 0.56
VPS33A-206ENST00000542310 FBXO40Q9UH90 709 aa18.54■□□□□ 0.56
VPS33A-206ENST00000542310 CTDP1Q9Y5B0 961 aaPredicted RBP18.54■□□□□ 0.56
VPS33A-206ENST00000542310 MCM3APO60318 1980 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 DNAJC25-GNG10A0A024R161 153 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 A0A0D9SFI3 127 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 PLA2G6O60733 806 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 PGK2P07205 417 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 FGRP09769 529 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 MAGEA10P43363 369 aaPredicted RBP18.53■□□□□ 0.56
VPS33A-206ENST00000542310 NOVP48745 357 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 VPS53Q5VIR6 699 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 ZNF467Q7Z7K2 595 aaPredicted RBP18.53■□□□□ 0.56
VPS33A-206ENST00000542310 FAM160B2Q86V87 743 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 KIFC2Q96AC6 838 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 LNPKQ9C0E8 428 aa18.53■□□□□ 0.56
VPS33A-206ENST00000542310 LRRC37A2A6NM11 1700 aa18.52■□□□□ 0.56
VPS33A-206ENST00000542310 SYN1P17600 705 aa18.52■□□□□ 0.56
VPS33A-206ENST00000542310 CHST13Q8NET6 341 aa18.52■□□□□ 0.56
VPS33A-206ENST00000542310 OSBPL3Q9H4L5 887 aa18.52■□□□□ 0.56
VPS33A-206ENST00000542310 RIPK3Q9Y572 518 aa18.52■□□□□ 0.56
VPS33A-206ENST00000542310 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 RARBP10826 455 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 PCP11498 1178 aaKnown RBP18.51■□□□□ 0.55
VPS33A-206ENST00000542310 AKR1A1P14550 325 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 SLC1A4P43007 532 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 CTDSPL2Q05D32 466 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 SNX17Q15036 470 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 LRRC41Q15345 812 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 PRAMEF19Q5SWL8 479 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 GJC2Q5T442 439 aaPredicted RBP18.51■□□□□ 0.55
VPS33A-206ENST00000542310 MAMDC4Q6UXC1 1216 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 CHD1LQ86WJ1 897 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 CPXCR1Q8N123 301 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 CHURC1Q8WUH1 139 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 FAM227BQ96M60 508 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 CNPY2Q9Y2B0 182 aa18.51■□□□□ 0.55
VPS33A-206ENST00000542310 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
VPS33A-206ENST00000542310 NUCB1Q02818 461 aa18.5■□□□□ 0.55
VPS33A-206ENST00000542310 C1orf53Q5VUE5 145 aa18.5■□□□□ 0.55
VPS33A-206ENST00000542310 TDHQ8IZJ6 230 aa18.5■□□□□ 0.55
VPS33A-206ENST00000542310 STAG1Q8WVM7 1258 aa18.5■□□□□ 0.55
VPS33A-206ENST00000542310 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
VPS33A-206ENST00000542310 RAVER2Q9HCJ3 691 aaKnown RBP18.5■□□□□ 0.55
VPS33A-206ENST00000542310 XPNPEP3Q9NQH7 507 aa18.5■□□□□ 0.55
VPS33A-206ENST00000542310 IL17RBQ9NRM6 502 aa18.5■□□□□ 0.55
VPS33A-206ENST00000542310 TRIM6-TRIM34B2RNG4 842 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 TMEM232C9JQI7 657 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 RANBP6O60518 1105 aaKnown RBP18.49■□□□□ 0.55
VPS33A-206ENST00000542310 FGAP02671 866 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 ZNF865P0CJ78 1059 aaPredicted RBP18.49■□□□□ 0.55
VPS33A-206ENST00000542310 HSPD1P10809 573 aaKnown RBP18.49■□□□□ 0.55
VPS33A-206ENST00000542310 NT5C2P49902 561 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 RTP1P59025 263 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 NMIQ13287 307 aaPredicted RBP18.49■□□□□ 0.55
VPS33A-206ENST00000542310 TKFCQ3LXA3 575 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 ANO1Q5XXA6 986 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 GPR153Q6NV75 609 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 RNF180Q86T96 592 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 ZNF589Q86UQ0 364 aaPredicted RBP18.49■□□□□ 0.55
VPS33A-206ENST00000542310 PHF24Q9UPV7 400 aa18.49■□□□□ 0.55
VPS33A-206ENST00000542310 ATN1P54259 1190 aaPredicted RBP18.48■□□□□ 0.55
VPS33A-206ENST00000542310 LRIT3Q3SXY7 679 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 PLEKHM2Q8IWE5 1019 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 ANKRD35Q8N283 1001 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 DCAF4Q8WV16 495 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 UBE2OQ9C0C9 1292 aaKnown RBP18.48■□□□□ 0.55
VPS33A-206ENST00000542310 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 TCP11L1Q9NUJ3 509 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 TACC3Q9Y6A5 838 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 LCTP09848 1927 aa18.48■□□□□ 0.55
VPS33A-206ENST00000542310 MCCP23508 829 aa18.47■□□□□ 0.55
VPS33A-206ENST00000542310 IKQ13123 557 aaPredicted RBP18.47■□□□□ 0.55
VPS33A-206ENST00000542310 RCSD1Q6JBY9 416 aa18.47■□□□□ 0.55
VPS33A-206ENST00000542310 SLC39A5Q6ZMH5 540 aa18.47■□□□□ 0.55
VPS33A-206ENST00000542310 RILPL2Q969X0 211 aa18.47■□□□□ 0.55
VPS33A-206ENST00000542310 PRKAG2Q9UGJ0 569 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms