RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
CNOT9-208ENST00000542068 ZNF185O15231 689 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 ARHGAP25P42331 645 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 CYP27A1Q02318 531 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 CTR9Q6PD62 1173 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 HEATR3Q7Z4Q2 680 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 GOLGA6L1Q8N7Z2 621 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 IQUBQ8NA54 791 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 NAA15Q9BXJ9 866 aaKnown RBP17.23■□□□□ 0.35
CNOT9-208ENST00000542068 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 EPN1Q9Y6I3 576 aaPredicted RBP17.23■□□□□ 0.35
CNOT9-208ENST00000542068 C4AP0C0L4 1744 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 ATP1A1P05023 1023 aaKnown RBP17.22■□□□□ 0.35
CNOT9-208ENST00000542068 MAPKAPK5Q8IW41 473 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 GSDMAQ96QA5 445 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 MMS19Q96T76 1030 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 PRCPP42785 496 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 KLK7P49862 253 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 DNA2P51530 1060 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 SPATA20Q8TB22 786 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 MTRQ99707 1265 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 PBX1P40424 430 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 DUSP10Q9Y6W6 482 aa17.22■□□□□ 0.35
CNOT9-208ENST00000542068 USP17L3A6NCW0 530 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 USP17L4A6NCW7 530 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 STAT6P42226 847 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 ATP2B2Q01814 1243 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 DNAJC21Q5F1R6 531 aaKnown RBP17.21■□□□□ 0.35
CNOT9-208ENST00000542068 TCP11X2Q5H9J9 407 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 USP17L1Q7RTZ2 530 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 TGFBRAP1Q8WUH2 860 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 TRIM47Q96LD4 638 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 JADE2Q9NQC1 790 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
CNOT9-208ENST00000542068 PMS1P54277 932 aaKnown RBP17.21■□□□□ 0.35
CNOT9-208ENST00000542068 TTC19Q6DKK2 380 aaPredicted RBP17.21■□□□□ 0.35
CNOT9-208ENST00000542068 RNF26Q9BY78 433 aaPredicted RBP17.21■□□□□ 0.35
CNOT9-208ENST00000542068 RTL9Q8NET4 1388 aa17.21■□□□□ 0.34
CNOT9-208ENST00000542068 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 NDUFA10O95299 355 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 TPTE2Q6XPS3 522 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 PHF20Q9BVI0 1012 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 POTEB2H3BUK9 544 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 RFC4P35249 363 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 UBE4AQ14139 1066 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 IL17AQ16552 155 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 SRBD1Q8N5C6 995 aaKnown RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 LUC7L2Q9Y383 392 aaKnown RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 REXO2Q9Y3B8 237 aaKnown RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 B4DLN1 442 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 RNF40O75150 1001 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 RPN1P04843 607 aaKnown RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 POLD4Q9HCU8 107 aa17.2■□□□□ 0.34
CNOT9-208ENST00000542068 BSDC1Q9NW68 430 aaPredicted RBP17.2■□□□□ 0.34
CNOT9-208ENST00000542068 TJP1Q07157 1748 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 TSPY3P0CV98 308 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 TSPY8P0CW00 308 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 MUM1L1Q5H9M0 696 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 SH3RF1Q7Z6J0 888 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 SRLQ86TD4 932 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 MSANTD4Q8NCY6 345 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 FERMT2Q96AC1 680 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 DCP1AQ9NPI6 582 aaPredicted RBP17.19■□□□□ 0.34
CNOT9-208ENST00000542068 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 MYH8P13535 1937 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 TRIM21P19474 475 aaKnown RBP17.19■□□□□ 0.34
CNOT9-208ENST00000542068 AGPAT5Q9NUQ2 364 aa17.19■□□□□ 0.34
CNOT9-208ENST00000542068 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
CNOT9-208ENST00000542068 CCDC194A0A1B0GVG4 234 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 C2orf54Q08AI8 447 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 SEC23AQ15436 765 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 WHAMMP3Q1A5X7 153 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 RAB21Q9UL25 225 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 RTCBQ9Y3I0 505 aaKnown RBP17.18■□□□□ 0.34
CNOT9-208ENST00000542068 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
CNOT9-208ENST00000542068 SMARCAL1Q9NZC9 954 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 ZNF804BA4D1E1 1349 aa17.18■□□□□ 0.34
CNOT9-208ENST00000542068 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
CNOT9-208ENST00000542068 PICALMQ13492 652 aa17.17■□□□□ 0.34
CNOT9-208ENST00000542068 ELOA2Q8IYF1 753 aaPredicted RBP17.17■□□□□ 0.34
CNOT9-208ENST00000542068 OR8K1Q8NGG5 319 aa17.17■□□□□ 0.34
CNOT9-208ENST00000542068 HPS3Q969F9 1004 aa17.17■□□□□ 0.34
CNOT9-208ENST00000542068 LACRTQ9GZZ8 138 aa17.17■□□□□ 0.34
CNOT9-208ENST00000542068 GBP3Q9H0R5 595 aa17.17■□□□□ 0.34
CNOT9-208ENST00000542068 MAGEC2Q9UBF1 373 aaPredicted RBP17.17■□□□□ 0.34
CNOT9-208ENST00000542068 SAR1BQ9Y6B6 198 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms