RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 ANAPC4Q9UJX5 808 aa13.51□□□□□ -0.25
VTN-203ENST00000542029 PLXNB2O15031 1838 aa13.5□□□□□ -0.25
VTN-203ENST00000542029 PLA2G6O60733 806 aa13.5□□□□□ -0.25
VTN-203ENST00000542029 PGK2P07205 417 aa13.5□□□□□ -0.25
VTN-203ENST00000542029 SLC1A4P43007 532 aa13.5□□□□□ -0.25
VTN-203ENST00000542029 MAGEA10P43363 369 aaPredicted RBP13.5□□□□□ -0.25
VTN-203ENST00000542029 MFAP1P55081 439 aaKnown RBP13.5□□□□□ -0.25
VTN-203ENST00000542029 FAM47AQ5JRC9 791 aa13.5□□□□□ -0.25
VTN-203ENST00000542029 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
VTN-203ENST00000542029 CPXCR1Q8N123 301 aa13.5□□□□□ -0.25
VTN-203ENST00000542029 LRRC47Q8N1G4 583 aaKnown RBP13.5□□□□□ -0.25
VTN-203ENST00000542029 STX8Q9UNK0 236 aa13.5□□□□□ -0.25
VTN-203ENST00000542029 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
VTN-203ENST00000542029 RANBP2P49792 3224 aaKnown RBP13.49□□□□□ -0.25
VTN-203ENST00000542029 SYNGAP1Q96PV0 1343 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 ORC4O43929 436 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 FGRP09769 529 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 PCP11498 1178 aaKnown RBP13.49□□□□□ -0.25
VTN-203ENST00000542029 AKR1A1P14550 325 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 SYN1P17600 705 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 NT5C2P49902 561 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 STAT2P52630 851 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 PRAMEF19Q5SWL8 479 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 GJC2Q5T442 439 aaPredicted RBP13.49□□□□□ -0.25
VTN-203ENST00000542029 GPR153Q6NV75 609 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 CCDC129Q6ZRS4 1044 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 RNF180Q86T96 592 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 STAG1Q8WVM7 1258 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 YTHDC1Q96MU7 727 aaKnown RBP13.49□□□□□ -0.25
VTN-203ENST00000542029 LBHD1Q9BQE6 289 aaPredicted RBP13.49□□□□□ -0.25
VTN-203ENST00000542029 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
VTN-203ENST00000542029 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
VTN-203ENST00000542029 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
VTN-203ENST00000542029 ZMYM6O95789 1325 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 DNAJC25-GNG10A0A024R161 153 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 TMEM232C9JQI7 657 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 FOXP2O15409 715 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 RANBP6O60518 1105 aaKnown RBP13.48□□□□□ -0.25
VTN-203ENST00000542029 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
VTN-203ENST00000542029 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
VTN-203ENST00000542029 LRRC41Q15345 812 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 TKFCQ3LXA3 575 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 LRIT3Q3SXY7 679 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 C1orf53Q5VUE5 145 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 TDHQ8IZJ6 230 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 RAVER2Q9HCJ3 691 aaKnown RBP13.48□□□□□ -0.25
VTN-203ENST00000542029 XPNPEP3Q9NQH7 507 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 RIPK3Q9Y572 518 aa13.48□□□□□ -0.25
VTN-203ENST00000542029 BAZ2AQ9UIF9 1905 aaKnown RBP13.48□□□□□ -0.25
VTN-203ENST00000542029 FGAP02671 866 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
VTN-203ENST00000542029 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
VTN-203ENST00000542029 MCCP23508 829 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 NOVP48745 357 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 RTP1P59025 263 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 CTDSPL2Q05D32 466 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 VPS53Q5VIR6 699 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 ANO1Q5XXA6 986 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 SLC39A5Q6ZMH5 540 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 ACAD9Q9H845 621 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 TCP11L1Q9NUJ3 509 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 FAM184BQ9ULE4 1060 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 ZNF236Q9UL36 1845 aa13.47□□□□□ -0.25
VTN-203ENST00000542029 A0A0D9SFI3 127 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 HIP1O00291 1037 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 HSPD1P10809 573 aaKnown RBP13.46□□□□□ -0.25
VTN-203ENST00000542029 NUCB1Q02818 461 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 SNX17Q15036 470 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 DCAF4Q8WV16 495 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 RILPL2Q969X0 211 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 FAM227BQ96M60 508 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 TSEN34Q9BSV6 310 aaKnown RBP13.46□□□□□ -0.25
VTN-203ENST00000542029 ABHD16BQ9H3Z7 469 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 RNF41Q9H4P4 317 aaPredicted RBP13.46□□□□□ -0.25
VTN-203ENST00000542029 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 PHF24Q9UPV7 400 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 A0A0G2JMZ2 1700 aa13.46□□□□□ -0.25
VTN-203ENST00000542029 CCDC171Q6TFL3 1326 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 MYH7P12883 1935 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 RLFQ13129 1914 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 SNAI1O95863 264 aaPredicted RBP13.45□□□□□ -0.26
VTN-203ENST00000542029 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
VTN-203ENST00000542029 ADCYAP1R1P41586 468 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 NMIQ13287 307 aaPredicted RBP13.45□□□□□ -0.26
VTN-203ENST00000542029 B4GALNT3Q6L9W6 998 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 TTC14Q96N46 770 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 SPC25Q9HBM1 224 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
VTN-203ENST00000542029 ATP11BQ9Y2G3 1177 aa13.45□□□□□ -0.26
VTN-203ENST00000542029 MOXD2PA6NHM9 499 aa13.44□□□□□ -0.26
VTN-203ENST00000542029 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms