RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 ENTPD3O75355 529 aa20.14■□□□□ 0.82
GABARAPL1-210ENST00000541960 GALNT17Q6IS24 598 aa20.14■□□□□ 0.82
GABARAPL1-210ENST00000541960 CEP57L1Q8IYX8 460 aa20.14■□□□□ 0.82
GABARAPL1-210ENST00000541960 FERMT2Q96AC1 680 aa20.14■□□□□ 0.82
GABARAPL1-210ENST00000541960 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.82
GABARAPL1-210ENST00000541960 ACTN4O43707 911 aaKnown RBP20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 NLRP12P59046 1061 aa20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 TGFB2P61812 414 aa20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 RRP1BQ14684 758 aaKnown RBP20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 CLRN2A0PK11 232 aa20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 VWA3AA6NCI4 1184 aa20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 GDF11O95390 407 aa20.14■□□□□ 0.81
GABARAPL1-210ENST00000541960 EEF2P13639 858 aaKnown RBP20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 SEPT2Q15019 361 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 INF2Q27J81 1249 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 GRAMD1CQ8IYS0 662 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 CCDC194A0A1B0GVG4 234 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 SMCO2A6NFE2 343 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 TCP10L2B9ZVM9 353 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 PRR29P0C7W0 189 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 KCTD1Q719H9 257 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 AOPEPQ8N6M6 819 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 JMJD4Q9H9V9 463 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 ZNRF3Q9ULT6 936 aa20.13■□□□□ 0.81
GABARAPL1-210ENST00000541960 PTMAP06454 111 aaKnown RBP20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 ADGRF4Q8IZF3 695 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 PCDHA5Q9Y5H7 936 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 SLC16A2P36021 539 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 ELOA2Q8IYF1 753 aaPredicted RBP20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 FAM177A1Q8N128 213 aaPredicted RBP20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 COA7Q96BR5 231 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 PPP1R11O60927 126 aaPredicted RBP20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 PLA2G4DQ86XP0 818 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 MKL1Q969V6 931 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 CSRNP1Q96S65 589 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 MTFR1LQ9H019 292 aa20.12■□□□□ 0.81
GABARAPL1-210ENST00000541960 COL2A1P02458 1487 aaPredicted RBP20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 NIM1KQ8IY84 436 aa20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 TRIM34Q9BYJ4 488 aa20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 VPS33BQ9H267 617 aa20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 ZNF70Q9UC06 446 aaPredicted RBP20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 BMP6P22004 513 aa20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 KANSL2Q9H9L4 492 aa20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 NYAP2Q9P242 653 aa20.11■□□□□ 0.81
GABARAPL1-210ENST00000541960 BRCA1P38398 1863 aaKnown RBP20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 ZNF75DP51815 510 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 CXCL9Q07325 125 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 POSTNQ15063 836 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 DLGAP5Q15398 846 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 DALRD3Q5D0E6 543 aaKnown RBP20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 CCDC125Q86Z20 511 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 CCDC12Q8WUD4 166 aaPredicted RBP20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 TMEM60Q9H2L4 133 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 ZKSCAN5Q9Y2L8 839 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 CNTNAP1P78357 1384 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 GOLGA6L19H0YKK7 550 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 ZRSR1Q15695 479 aaKnown RBP20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 SPC24Q8NBT2 197 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 DHX58Q96C10 678 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 ZNF830Q96NB3 372 aaPredicted RBP20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 BPIFA3Q9BQP9 254 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 NAT10Q9H0A0 1025 aaKnown RBP20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 CLCN1P35523 988 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 CDAN1Q8IWY9 1227 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 C6orf50Q9HD87 102 aa20.1■□□□□ 0.81
GABARAPL1-210ENST00000541960 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.1■□□□□ 0.819e-6■■■■□ 20.1
GABARAPL1-210ENST00000541960 BECN2A8MW95 431 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 ABCB5Q2M3G0 1257 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 TMEM179Q6ZVK1 233 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 TRIM5Q9C035 493 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 PPP1R1BQ9UD71 204 aaPredicted RBP20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 USP17L10C9JJH3 530 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 POLD1P28340 1107 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 ICA1Q05084 483 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 SPDYE2Q495Y8 402 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 GPATCH4Q5T3I0 446 aaKnown RBP20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 OGFOD1Q8N543 542 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 TMEM260Q9NX78 707 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 HDAC9Q9UKV0 1011 aa20.09■□□□□ 0.81
GABARAPL1-210ENST00000541960 ESYT2A0FGR8 921 aa20.08■□□□□ 0.81
GABARAPL1-210ENST00000541960 NFKBIEO00221 500 aa20.08■□□□□ 0.81
GABARAPL1-210ENST00000541960 GNA11P29992 359 aa20.08■□□□□ 0.81
GABARAPL1-210ENST00000541960 NCAPHQ15003 741 aa20.08■□□□□ 0.81
GABARAPL1-210ENST00000541960 R3HDM1Q15032 1099 aaKnown RBP20.08■□□□□ 0.81
GABARAPL1-210ENST00000541960 BIN2Q9UBW5 565 aaPredicted RBP20.08■□□□□ 0.81
GABARAPL1-210ENST00000541960 FER1L6Q2WGJ9 1857 aa20.08■□□□□ 0.81
GABARAPL1-210ENST00000541960 GH2P01242 217 aa20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 ARL6IP4Q66PJ3 421 aaKnown RBP20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 SARM1Q6SZW1 724 aa20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 MTMR8Q96EF0 704 aa20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 RAD21O60216 631 aa20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 SARSP49591 514 aaKnown RBP20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 NT5DC1Q5TFE4 455 aa20.08■□□□□ 0.8
GABARAPL1-210ENST00000541960 PPP4R3BQ5MIZ7 849 aa20.07■□□□□ 0.8
GABARAPL1-210ENST00000541960 JAKMIP3Q5VZ66 844 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms