RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 STK3Q13188 491 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 NTRK3Q16288 839 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 TTBK2Q6IQ55 1244 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 LBX2Q6XYB7 198 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 RAB11FIP4Q86YS3 637 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 IFNL1Q8IU54 200 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 CCDC144CPQ8IYA2 1237 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 SRBD1Q8N5C6 995 aaKnown RBP18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 TANGO6Q9C0B7 1094 aa18.07■□□□□ 0.48
LRTOMT-219ENST00000541899 PDHXO00330 501 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 FLOT1O75955 427 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 IFNAR1P17181 557 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 DSG3P32926 999 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 HTRA3P83110 453 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 FUT2Q10981 343 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 CUL4AQ13619 759 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 SYDE2Q5VT97 1194 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 CPLX2Q6PUV4 134 aaKnown RBP18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 HSCBQ8IWL3 235 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 GTF3C2Q8WUA4 911 aaPredicted RBP18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 MTMR8Q96EF0 704 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 SLF1Q9BQI6 1058 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 LLPHQ9BRT6 129 aaKnown RBP18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 ASCC2Q9H1I8 757 aaPredicted RBP18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 NCOA5Q9HCD5 579 aaKnown RBP18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 PPP1R9AQ9ULJ8 1098 aa18.06■□□□□ 0.48
LRTOMT-219ENST00000541899 IGF2BP3O00425 579 aaKnown RBP eCLIP18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 CPLX1O14810 134 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 CYTH3O43739 400 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 AOC2O75106 756 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 CDKL5O76039 1030 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 ALDH1A1P00352 501 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 IRX3P78415 501 aaPredicted RBP18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 NBPF11Q86T75 865 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 NECAB1Q8N987 351 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 ZIC5Q96T25 663 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 UBA5Q9GZZ9 404 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 FBXO28Q9NVF7 368 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 PRR12Q9ULL5 1215 aa18.05■□□□□ 0.48
LRTOMT-219ENST00000541899 PLEKHA8P1O95397 391 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 SLC16A2P36021 539 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 ST3GAL1Q11201 340 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 IKQ13123 557 aaPredicted RBP18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 GRM1Q13255 1194 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 SLC35G1Q2M3R5 365 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 MB21D1Q8N884 522 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 P2RX7Q99572 595 aaKnown RBP18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 JMJD4Q9H9V9 463 aa18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 RBM27Q9P2N5 1060 aaKnown RBP18.04■□□□□ 0.48
LRTOMT-219ENST00000541899 A0A0G2JMZ2 1700 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 CNTNAP5Q8WYK1 1306 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 SPDYE16A6NNV3 312 aaPredicted RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 PRPF3O43395 683 aaKnown RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 HERVK_113P62684 666 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 BECN1Q14457 450 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 CCDC83Q8IWF9 413 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 KIFC2Q96AC6 838 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 INTS4Q96HW7 963 aaKnown RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 PARK7Q99497 189 aaKnown RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 RNF26Q9BY78 433 aaPredicted RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 SLC38A10Q9HBR0 1119 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 PNMA2Q9UL42 364 aa18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 ISY1Q9ULR0 285 aaKnown RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
LRTOMT-219ENST00000541899 VWA5AO00534 786 aa18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 ATP2A1O14983 1001 aa18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 CTDNEP1O95476 244 aa18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 GCLCP48506 637 aaPredicted RBP18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 OAZ1P54368 228 aa18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 NSUN7Q8NE18 718 aaKnown RBP18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 SMARCC2Q8TAQ2 1214 aa18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 CPVLQ9H3G5 476 aa18.02■□□□□ 0.48
LRTOMT-219ENST00000541899 STK36Q9NRP7 1315 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 COL11A1P12107 1806 aaPredicted RBP18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 ZBTB5O15062 677 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 ZBED4O75132 1171 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 FMNL1O95466 1100 aaPredicted RBP18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 SSRP1Q08945 709 aaKnown RBP18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 TRIM22Q8IYM9 498 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 DNAJC5GQ8N7S2 189 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 REPS2Q8NFH8 660 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 ATG4CQ96DT6 458 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 MYH6P13533 1939 aa18.01■□□□□ 0.47
LRTOMT-219ENST00000541899 CA12O43570 354 aa18■□□□□ 0.47
LRTOMT-219ENST00000541899 ANP32AP39687 249 aaKnown RBP18■□□□□ 0.47
LRTOMT-219ENST00000541899 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
LRTOMT-219ENST00000541899 TRAF1Q13077 416 aa18■□□□□ 0.47
LRTOMT-219ENST00000541899 POTEEQ6S8J3 1075 aa18■□□□□ 0.47
LRTOMT-219ENST00000541899 CCDC82Q8N4S0 544 aa18■□□□□ 0.47
LRTOMT-219ENST00000541899 VAT1LQ9HCJ6 419 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms