RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SMARCC1Q92922 1105 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-217ENST00000541578 SLC38A3Q99624 504 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 SRRTQ9BXP5 876 aaKnown RBP6.24□□□□□ -1.41
SNHG1-217ENST00000541578 SP110Q9HB58 689 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 PRR13Q9NZ81 148 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 MINPP1Q9UNW1 487 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 MEIS1O00470 390 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 FKTNO75072 461 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 CDK11BP21127 795 aaKnown RBP6.23□□□□□ -1.41
SNHG1-217ENST00000541578 MESP2Q0VG99 397 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 ZYXQ15942 572 aaKnown RBP6.23□□□□□ -1.41
SNHG1-217ENST00000541578 PKN1Q16512 942 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 BBS9Q3SYG4 887 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 TDRD10Q5VZ19 366 aaKnown RBP6.23□□□□□ -1.41
SNHG1-217ENST00000541578 VPS37DQ86XT2 251 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 OR6P1Q8NGX9 317 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 CPLX3Q8WVH0 158 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 SEC16BQ96JE7 1060 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 PUS7Q96PZ0 661 aaKnown RBP6.23□□□□□ -1.41
SNHG1-217ENST00000541578 RNF32Q9H0A6 362 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 ACBD3Q9H3P7 528 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 EBF1Q9UH73 591 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 ZNF214Q9UL59 606 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-217ENST00000541578 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-217ENST00000541578 INPP5FQ9Y2H2 1132 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 RB1CC1Q8TDY2 1594 aa6.23□□□□□ -1.41
SNHG1-217ENST00000541578 TMEM82A0PJX8 343 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 TP53P04637 393 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-217ENST00000541578 ENDOUP21128 410 aaKnown RBP6.22□□□□□ -1.41
SNHG1-217ENST00000541578 GIPRP48546 466 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 NASPP49321 788 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-217ENST00000541578 SNX17Q15036 470 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 SLC14A2Q15849 920 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 AXDND1Q5T1B0 1012 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-217ENST00000541578 PPFIBP1Q86W92 1011 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 MAP6Q96JE9 813 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 DIRC2Q96SL1 478 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 G6PC3Q9BUM1 346 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 DSCC1Q9BVC3 393 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 NSUN3Q9H649 340 aaKnown RBP6.22□□□□□ -1.41
SNHG1-217ENST00000541578 SLC12A7Q9Y666 1083 aa6.22□□□□□ -1.41
SNHG1-217ENST00000541578 GSNP06396 782 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 DNAJA1P31689 397 aaKnown RBP6.21□□□□□ -1.42
SNHG1-217ENST00000541578 BMP8BP34820 402 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 GTF2F1P35269 517 aaKnown RBP eCLIP6.21□□□□□ -1.42
SNHG1-217ENST00000541578 CTSKP43235 329 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 TIGD5Q53EQ6 642 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 NOL9Q5SY16 702 aaKnown RBP6.21□□□□□ -1.42
SNHG1-217ENST00000541578 DCAF15Q66K64 600 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 C19orf47Q8N9M1 422 aaKnown RBP6.21□□□□□ -1.42
SNHG1-217ENST00000541578 CWC22Q9HCG8 908 aaKnown RBP6.21□□□□□ -1.42
SNHG1-217ENST00000541578 DCP1AQ9NPI6 582 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-217ENST00000541578 FAM86C1Q9NVL1 165 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 LTBP3Q9NS15 1303 aa6.21□□□□□ -1.42
SNHG1-217ENST00000541578 SMARCA5O60264 1052 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-217ENST00000541578 VAV1P15498 845 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 KIR2DL1P43626 348 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-217ENST00000541578 KIR2DL2P43627 348 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-217ENST00000541578 TCEAL1Q15170 157 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 ZNF124Q15973 351 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 CWF19L1Q69YN2 538 aaKnown RBP6.2□□□□□ -1.42
SNHG1-217ENST00000541578 ZPBP2Q6X784 338 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 HHIPL1Q96JK4 782 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 SLC6A17Q9H1V8 727 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 EPB41L4BQ9H329 900 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 GP6Q9HCN6 339 aa6.2□□□□□ -1.42
SNHG1-217ENST00000541578 YBX2Q9Y2T7 364 aaKnown RBP6.2□□□□□ -1.42
SNHG1-217ENST00000541578 A0A1W2PQH9 124 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 SHOXO15266 292 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 PSPNO60542 156 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 ZNF205O95201 554 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 CD247P20963 164 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 ZNF445P59923 1031 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 ARID5AQ03989 594 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 PPP2R5EQ16537 467 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 GNPTABQ3T906 1256 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 CRTC3Q6UUV7 619 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 SYDE1Q6ZW31 735 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-217ENST00000541578 SLC43A3Q8NBI5 491 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 FBXO15Q8NCQ5 510 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-217ENST00000541578 BHLHE22Q8NFJ8 381 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-217ENST00000541578 SHDQ96IW2 340 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 DNAJC2Q99543 621 aaKnown RBP6.19□□□□□ -1.42
SNHG1-217ENST00000541578 CDADC1Q9BWV3 514 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 PHAXQ9H814 394 aaKnown RBP6.19□□□□□ -1.42
SNHG1-217ENST00000541578 TNFRSF10DQ9UBN6 386 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 STRIP2Q9ULQ0 834 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 ZNF451Q9Y4E5 1061 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 FHOD1Q9Y613 1164 aa6.19□□□□□ -1.42
SNHG1-217ENST00000541578 NOTOA8MTQ0 251 aa6.18□□□□□ -1.42
SNHG1-217ENST00000541578 USP2O75604 605 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-217ENST00000541578 ITGA4P13612 1032 aa6.18□□□□□ -1.42
SNHG1-217ENST00000541578 RTP1P59025 263 aa6.18□□□□□ -1.42
SNHG1-217ENST00000541578 SLC7A5Q01650 507 aa6.18□□□□□ -1.42
SNHG1-217ENST00000541578 IRF2BP1Q8IU81 584 aa6.18□□□□□ -1.42
SNHG1-217ENST00000541578 BRF1Q92994 677 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms