RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 MAPKAPK5Q8IW41 473 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 ANKRD2Q9GZV1 360 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
EIF3A-203ENST00000541549 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 FAM184BQ9ULE4 1060 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
EIF3A-203ENST00000541549 CLUL1Q15846 466 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
EIF3A-203ENST00000541549 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
EIF3A-203ENST00000541549 HIP1RO75146 1068 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 XRCC5P13010 732 aaKnown RBP13.28□□□□□ -0.28
EIF3A-203ENST00000541549 CFAP157Q5JU67 520 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 ANKRD20A3Q5VUR7 823 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 FNBP1Q96RU3 617 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 ZSCAN10Q96SZ4 725 aaPredicted RBP13.28□□□□□ -0.28
EIF3A-203ENST00000541549 AGTPBP1Q9UPW5 1226 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 CIB2O75838 187 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
EIF3A-203ENST00000541549 SCG2P13521 617 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 KIFAP3Q92845 792 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 MYOM2P54296 1465 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 ST5P78524 1137 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 TCP11Q8WWU5 503 aa13.28□□□□□ -0.28
EIF3A-203ENST00000541549 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
EIF3A-203ENST00000541549 ARMCX3Q9UH62 379 aaPredicted RBP13.28□□□□□ -0.28
EIF3A-203ENST00000541549 PHKA1P46020 1223 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 SPATS2Q86XZ4 545 aaKnown RBP13.27□□□□□ -0.28
EIF3A-203ENST00000541549 OSBP2Q969R2 916 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 IQCDQ96DY2 449 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 PLCB1Q9NQ66 1216 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 BACH1O14867 736 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 GAS8O95995 478 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 H2AFZP0C0S5 128 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 SLFN14P0C7P3 912 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 GOLGA8HP0CJ92 632 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 C2orf54Q08AI8 447 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 PPP1R21Q6ZMI0 780 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 H2AFVQ71UI9 128 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 RNF10Q8N5U6 811 aaKnown RBP13.27□□□□□ -0.28
EIF3A-203ENST00000541549 PNMA1Q8ND90 353 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 KLHL14Q9P2G3 628 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 FAM169AQ9Y6X4 670 aa13.27□□□□□ -0.28
EIF3A-203ENST00000541549 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.29
EIF3A-203ENST00000541549 ARHGEF35A5YM69 484 aa13.27□□□□□ -0.29
EIF3A-203ENST00000541549 BCAMP50895 628 aa13.27□□□□□ -0.29
EIF3A-203ENST00000541549 CC2D1AQ6P1N0 951 aaPredicted RBP13.27□□□□□ -0.29
EIF3A-203ENST00000541549 BANK1Q8NDB2 785 aa13.27□□□□□ -0.29
EIF3A-203ENST00000541549 NAP1L4Q99733 375 aaKnown RBP13.27□□□□□ -0.29
EIF3A-203ENST00000541549 IFNB1P01574 187 aa13.27□□□□□ -0.29
EIF3A-203ENST00000541549 CCDC62Q6P9F0 684 aa13.27□□□□□ -0.29
EIF3A-203ENST00000541549 JPH2Q9BR39 696 aaPredicted RBP13.27□□□□□ -0.29
EIF3A-203ENST00000541549 NYXQ9GZU5 481 aa13.27□□□□□ -0.29
EIF3A-203ENST00000541549 KDM5AP29375 1690 aaKnown RBP13.26□□□□□ -0.29
EIF3A-203ENST00000541549 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 TBC1D8O95759 1140 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 TOB2Q14106 344 aaPredicted RBP13.26□□□□□ -0.29
EIF3A-203ENST00000541549 MAP7D1Q3KQU3 841 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 PLA2G4DQ86XP0 818 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 TXNDC9O14530 226 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 NDUFA10O95299 355 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 CYP2E1P05181 493 aaPredicted RBP13.26□□□□□ -0.29
EIF3A-203ENST00000541549 SLC1A4P43007 532 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 EPHB4P54760 987 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 SLC7A5Q01650 507 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 SDCCAG8Q86SQ7 713 aaPredicted RBP13.26□□□□□ -0.29
EIF3A-203ENST00000541549 RASGRP4Q8TDF6 673 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 TGFBRAP1Q8WUH2 860 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 FOXP1Q9H334 677 aaPredicted RBP13.26□□□□□ -0.29
EIF3A-203ENST00000541549 OR52Z1P0C646 297 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 GYG1P46976 350 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 PARP10Q53GL7 1025 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 CAPN12Q6ZSI9 719 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 EPSTI1Q96J88 318 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 MROH5Q6ZUA9 1318 aa13.26□□□□□ -0.29
EIF3A-203ENST00000541549 M0R2C6 588 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 BCRP11274 1271 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 SNCBQ16143 134 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 GPBP1Q86WP2 473 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 CCDC110Q8TBZ0 833 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 VPS37BQ9H9H4 285 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 TOGARAM2Q6ZUX3 1019 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 OGFOD1Q8N543 542 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 VCXQ9H320 206 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 VEZTQ9HBM0 779 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 PCDHA12Q9UN75 941 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 DDX39AO00148 427 aaKnown RBP13.25□□□□□ -0.29
EIF3A-203ENST00000541549 SLC8A1P32418 973 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 PSMD6Q15008 389 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 LLGL1Q15334 1064 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 USH1GQ495M9 461 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 FAM26FQ5R3K3 315 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 RAB3IL1Q8TBN0 382 aa13.25□□□□□ -0.29
EIF3A-203ENST00000541549 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms