RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SF3B2Q13435 895 aaKnown RBP19.52■□□□□ 0.72
SPIDR-227ENST00000541342 STAG2Q8N3U4 1231 aa19.52■□□□□ 0.72
SPIDR-227ENST00000541342 TEKT1Q969V4 418 aa19.52■□□□□ 0.72
SPIDR-227ENST00000541342 TMEM47Q9BQJ4 181 aa19.52■□□□□ 0.72
SPIDR-227ENST00000541342 CUTAO60888 179 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 TBX2Q13207 712 aaPredicted RBP19.51■□□□□ 0.71
SPIDR-227ENST00000541342 STRIP1Q5VSL9 837 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 HSP90AA4PQ58FG1 418 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 KIAA0825Q8IV33 1275 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 NEDD1Q8NHV4 660 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 MAD2L2Q9UI95 211 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 STX8Q9UNK0 236 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 CBFA2T2O43439 604 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 C21orf2O43822 256 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 CRKP46108 304 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 GABPAQ06546 454 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 CCDC178Q5BJE1 867 aa19.51■□□□□ 0.71
SPIDR-227ENST00000541342 NRDCO43847 1150 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 FMR1Q06787 632 aaKnown RBP eCLIP19.5■□□□□ 0.711e-11■■■■■ 41.2
SPIDR-227ENST00000541342 GRM4Q14833 912 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 NPY5RQ15761 445 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 RASGRP2Q7LDG7 609 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 TADA3O75528 432 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 ZRANB2O95218 330 aaKnown RBP eCLIP19.5■□□□□ 0.71
SPIDR-227ENST00000541342 SLC35G1Q2M3R5 365 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 CNNM3Q8NE01 707 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 MED15Q96RN5 788 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 TOP1P11387 765 aaKnown RBP19.5■□□□□ 0.71
SPIDR-227ENST00000541342 KIF5BP33176 963 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 NFIAQ12857 509 aa19.5■□□□□ 0.71
SPIDR-227ENST00000541342 EARS2Q5JPH6 523 aaKnown RBP19.5■□□□□ 0.71
SPIDR-227ENST00000541342 FAM205CA6NFA0 338 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 PNMA6AP0CW24 399 aaPredicted RBP19.49■□□□□ 0.71
SPIDR-227ENST00000541342 FKBP1AP62942 108 aaKnown RBP19.49■□□□□ 0.71
SPIDR-227ENST00000541342 PRR29P0C7W0 189 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 ZNF18P17022 549 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 XBP1P17861 261 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 CEP95Q96GE4 821 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 ZDHHC15Q96MV8 337 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 MAN1B1Q9UKM7 699 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 PPP2R2CQ9Y2T4 447 aa19.49■□□□□ 0.71
SPIDR-227ENST00000541342 CCP110O43303 1012 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 SCG2P13521 617 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 PLA2G4AP47712 749 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 PFKFB3Q16875 520 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-227ENST00000541342 KRI1Q8N9T8 703 aaKnown RBP19.48■□□□□ 0.71
SPIDR-227ENST00000541342 WDR24Q96S15 920 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 CABP5Q9NP86 173 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 SIPA1L1O43166 1804 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 KCNA3P22001 575 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 KRT2P35908 639 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 FCHSD1Q86WN1 690 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 ZFPM1Q8IX07 1006 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 TC2NQ8N9U0 490 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 FBXO2Q9UK22 296 aaPredicted RBP19.48■□□□□ 0.71
SPIDR-227ENST00000541342 PCDHB6Q9Y5E3 794 aa19.48■□□□□ 0.71
SPIDR-227ENST00000541342 YDJCA8MPS7 323 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 ADAMTS3O15072 1205 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 MYO1BO43795 1136 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 NOVP48745 357 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 BMS1Q14692 1282 aaKnown RBP19.47■□□□□ 0.71
SPIDR-227ENST00000541342 NOM1Q5C9Z4 860 aaKnown RBP19.47■□□□□ 0.71
SPIDR-227ENST00000541342 RILPL1Q5EBL4 403 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 NT5DC1Q5TFE4 455 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 ARHGAP6O43182 974 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 TOGARAM2Q6ZUX3 1019 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 ELOA2Q8IYF1 753 aaPredicted RBP19.47■□□□□ 0.71
SPIDR-227ENST00000541342 TNFRSF25Q93038 417 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 CARD6Q9BX69 1037 aa19.47■□□□□ 0.71
SPIDR-227ENST00000541342 CYTH3O43739 400 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 URI1O94763 535 aaPredicted RBP19.46■□□□□ 0.71
SPIDR-227ENST00000541342 SARSP49591 514 aaKnown RBP19.46■□□□□ 0.71
SPIDR-227ENST00000541342 CC2D2BQ6DHV5 1058 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 GRAMD1CQ8IYS0 662 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 MRIQ9BWK5 157 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 PSME4Q14997 1843 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 KIF13BQ9NQT8 1826 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 PALM3A6NDB9 673 aaPredicted RBP19.46■□□□□ 0.71
SPIDR-227ENST00000541342 SLURP2P0DP57 97 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 CACNB3P54284 484 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 EPC1Q9H2F5 836 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 PLIN4Q96Q06 1357 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 POSTNQ15063 836 aa19.46■□□□□ 0.71
SPIDR-227ENST00000541342 PPIP5K2O43314 1243 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 GOLGA8HP0CJ92 632 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 AKR1B1P15121 316 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 TRMT44Q8IYL2 757 aaKnown RBP19.45■□□□□ 0.7
SPIDR-227ENST00000541342 TTLL6Q8N841 843 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 UBXN4Q92575 508 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 SERPINB13Q9UIV8 391 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 NFE2L3Q9Y4A8 694 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 DPEP1P16444 411 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 PTPREP23469 700 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 WNT7AO00755 349 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 POLR2DO15514 142 aaKnown RBP19.45■□□□□ 0.7
SPIDR-227ENST00000541342 ADKP55263 362 aaKnown RBP19.45■□□□□ 0.7
SPIDR-227ENST00000541342 MORC3Q14149 939 aa19.45■□□□□ 0.7
SPIDR-227ENST00000541342 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
SPIDR-227ENST00000541342 BAG1Q99933 345 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms