RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 DSCC1Q9BVC3 393 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 NACAP1Q9BZK3 213 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 PIH1D3Q9NQM4 214 aaKnown RBP6.85□□□□□ -1.31
CDKN3-206ENST00000541304 CTNNA3Q9UI47 895 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 PCDHGC4Q9Y5F7 938 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 PCDHGA11Q9Y5H2 935 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 AKAP11Q9UKA4 1901 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 TIAM2Q8IVF5 1701 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 AK9Q5TCS8 1911 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 ZNF532Q9HCE3 1301 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 TCRBV5S4A2TA0A5A2 114 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 CDK2AP1O14519 115 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 MYO1BO43795 1136 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.31
CDKN3-206ENST00000541304 YBX3P16989 372 aaKnown RBP eCLIP6.84□□□□□ -1.311e-7■■□□□ 11.7
CDKN3-206ENST00000541304 PRDX5P30044 214 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 MECOMQ03112 1051 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
CDKN3-206ENST00000541304 PI16Q6UXB8 463 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 AMOTL1Q8IY63 956 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 MAGEB6Q8N7X4 407 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 EDARADDQ8WWZ3 215 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 ZDHHC15Q96MV8 337 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 BACH2Q9BYV9 841 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 CRNKL1Q9BZJ0 848 aaKnown RBP6.84□□□□□ -1.31
CDKN3-206ENST00000541304 ANTXR1Q9H6X2 564 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 ATP8A2Q9NTI2 1148 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 TMOD2Q9NZR1 351 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 RNF181Q9P0P0 153 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 MKL2Q9ULH7 1088 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 TTF2Q9UNY4 1162 aaKnown RBP6.84□□□□□ -1.31
CDKN3-206ENST00000541304 USP3Q9Y6I4 520 aa6.84□□□□□ -1.31
CDKN3-206ENST00000541304 COL2A1P02458 1487 aaPredicted RBP6.84□□□□□ -1.31
CDKN3-206ENST00000541304 DICER1Q9UPY3 1922 aaKnown RBP6.84□□□□□ -1.32
CDKN3-206ENST00000541304 GPR75-ASB3A0A0A6YYF3 556 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 A0A1W2PNR3 127 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 DCDC2BA2VCK2 349 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 IQCA1LA6NCM1 817 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 YDJCA8MPS7 323 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 PSMD14O00487 310 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ATXN7O15265 892 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ARAFP10398 606 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 CYP7A1P22680 504 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF280AP59817 542 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ANAPC15P60006 121 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 CXCL9Q07325 125 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 NMIQ13287 307 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 TNFAIP1Q13829 316 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 KRT32Q14532 448 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 FKBP1CQ5VVH2 108 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 CWC27Q6UX04 472 aaKnown RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 C1orf229Q6ZS94 237 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 GPR101Q96P66 508 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 GMLQ99445 158 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ZCCHC2Q9C0B9 1178 aaKnown RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 RRAGCQ9HB90 399 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF287Q9HBT7 754 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF358Q9NW07 568 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 ARPP21Q9UBL0 812 aaPredicted RBP6.83□□□□□ -1.32
CDKN3-206ENST00000541304 MYH7P12883 1935 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 CCDC88AQ3V6T2 1871 aa6.83□□□□□ -1.32
CDKN3-206ENST00000541304 COL4A5P29400 1685 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 A0A0D9SFI3 127 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 WTIPA6NIX2 430 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-206ENST00000541304 H7C1D1 291 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 C2CD2LO14523 706 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 GPAA1O43292 621 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 RAD17O75943 681 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 FAM157BP0CG42 384 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 ZKSCAN1P17029 563 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-206ENST00000541304 AMPD1P23109 780 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 CRKP46108 304 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 SNRPNP63162 240 aaKnown RBP6.82□□□□□ -1.32
CDKN3-206ENST00000541304 CTBSQ01459 385 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 DLGAP5Q15398 846 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 ALX1Q15699 326 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 PLA2G4EQ3MJ16 856 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 C9orf131Q5VYM1 1079 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 HOOK2Q96ED9 719 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 EDC3Q96F86 508 aaKnown RBP6.82□□□□□ -1.32
CDKN3-206ENST00000541304 RIOK1Q9BRS2 568 aaKnown RBP6.82□□□□□ -1.32
CDKN3-206ENST00000541304 DHX36Q9H2U1 1008 aaKnown RBP6.82□□□□□ -1.32
CDKN3-206ENST00000541304 ANO2Q9NQ90 1003 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 WWC3Q9ULE0 1092 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 GJA3Q9Y6H8 435 aa6.82□□□□□ -1.32
CDKN3-206ENST00000541304 ZNF646O15015 1829 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-206ENST00000541304 PITPNM2Q9BZ72 1349 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 GLTPD2A6NH11 291 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 PATL2C9JE40 543 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 MBD4O95243 580 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 SLC3A2P08195 630 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 HMGB1P09429 215 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 MAPTP10636 758 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 EPXP11678 715 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 BTDP43251 543 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 TNNI2P48788 182 aa6.81□□□□□ -1.32
CDKN3-206ENST00000541304 RBM25P49756 843 aaKnown RBP6.81□□□□□ -1.32
CDKN3-206ENST00000541304 IMMTQ16891 758 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms