RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 MRPL50Q8N5N7 158 aaKnown RBP6.9□□□□□ -1.31
LMO3-225ENST00000541295 VPS33BQ9H267 617 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 MCM8Q9UJA3 840 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 DDX19BQ9UMR2 479 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 MAPK8IP1Q9UQF2 711 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 C2CD2Q9Y426 696 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 ARPC4-TTLL3A0A0A6YYG9 625 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 ORC4O43929 436 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 CHMLP26374 656 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 STK3Q13188 491 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 CUL3Q13618 768 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 Q3C1V9 767 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 C1orf141Q5JVX7 400 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 RCSD1Q6JBY9 416 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 SLC4A10Q6U841 1118 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 KCNN1Q92952 543 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 SPDL1Q96EA4 605 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 MARF1Q9Y4F3 1742 aaKnown RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 KDRP35968 1356 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 MAP3K5Q99683 1374 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 IBTKQ9P2D0 1353 aaPredicted RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 TMEM232C9JQI7 657 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 RASA4O43374 803 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 TBC1D12O60347 775 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 EVI5O60447 810 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 EZRP15311 586 aaKnown RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 TCF7P36402 384 aaPredicted RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 HSD17B7P56937 341 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 TEFQ10587 303 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 CLIP3Q96DZ5 547 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 ALS2CR12Q96Q35 445 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 UQCC2Q9BRT2 126 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 ACBD3Q9H3P7 528 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 VCPKMTQ9H867 229 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 TCF7L2Q9NQB0 619 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 SLAIN2Q9P270 581 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 NFAT5O94916 1531 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 KRT18P05783 430 aaKnown RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 EIF2S2P20042 333 aaKnown RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 ACTN2P35609 894 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 MXI1P50539 228 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 PABPC4Q13310 644 aaKnown RBP eCLIP6.89□□□□□ -1.31
LMO3-225ENST00000541295 CCDC57Q2TAC2 916 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 FAM133BQ5BKY9 247 aaKnown RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 NXNQ6DKJ4 435 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 LRRC31Q6UY01 552 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 IL17REQ8NFR9 667 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 RAPGEF4Q8WZA2 1011 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 CUL5Q93034 780 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 CFAP36Q96G28 342 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 GPR101Q96P66 508 aaPredicted RBP6.89□□□□□ -1.31
LMO3-225ENST00000541295 LGR6Q9HBX8 967 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 RIC8AQ9NPQ8 531 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 PRDM11Q9NQV5 511 aa6.89□□□□□ -1.31
LMO3-225ENST00000541295 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 IQCA1LA6NCM1 817 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 M0R2C6 588 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 CLASP2O75122 1294 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 MBD4O95243 580 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 SLC4A2P04920 1241 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 MYL3P08590 195 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 PARP1P09874 1014 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 CENPAP49450 140 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 CCT8P50990 548 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 SLC8A3P57103 927 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 PLEKHO1Q53GL0 409 aaPredicted RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 TNNI3KQ59H18 835 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 CAVIN1Q6NZI2 390 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 CCDC170Q8IYT3 715 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 TRIML2Q8N7C3 387 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.88□□□□□ -1.31
LMO3-225ENST00000541295 NELL1Q92832 810 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 SNX21Q969T3 373 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 KIF1BPQ96EK5 621 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 PDLIM2Q96JY6 352 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 MRPL46Q9H2W6 279 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 SH3GLB2Q9NR46 395 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 TTF2Q9UNY4 1162 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 KIF24Q5T7B8 1368 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 RGPD1P0DJD0 1748 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 BIN1O00499 593 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 TTI1O43156 1089 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 SKIP12755 728 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 ENDOUP21128 410 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 ATP5DP30049 168 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 SKOR1P84550 965 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 LZICQ8WZA0 190 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 RBM41Q96IZ5 413 aaKnown RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 SPATA17Q96L03 361 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 STRN4Q9NRL3 753 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 PRKAG2Q9UGJ0 569 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 LIMCH1Q9UPQ0 1083 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 KIAA0232Q92628 1395 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
LMO3-225ENST00000541295 CCDC163A0A0D9SF12 145 aa6.88□□□□□ -1.31
LMO3-225ENST00000541295 HALP42357 657 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms