RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 CLEC10AQ8IUN9 316 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 APOBEC3FQ8IUX4 373 aaKnown RBP11.61□□□□□ -0.55
MRE11-210ENST00000541157 TATDN2Q93075 761 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 C8orf76Q96K31 380 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 NYAP2Q9P242 653 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 ATP6V1DQ9Y5K8 247 aa11.61□□□□□ -0.55
MRE11-210ENST00000541157 CNTNAP5Q8WYK1 1306 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 GDF11O95390 407 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 DEXIO95424 95 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 JAG1P78504 1218 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 RESTQ13127 1097 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 SEPT2Q15019 361 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 ANGEL2Q5VTE6 544 aaKnown RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 LAPTM4BQ86VI4 370 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 CMTR1Q8N1G2 835 aaKnown RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 FBXO18Q8NFZ0 1043 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 LZTS2Q9BRK4 669 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 DEFB129Q9H1M3 183 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 ADARB2Q9NS39 739 aaKnown RBP11.6□□□□□ -0.55
MRE11-210ENST00000541157 GGA3Q9NZ52 723 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 MAD2L2Q9UI95 211 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 PPP2R3BQ9Y5P8 575 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
MRE11-210ENST00000541157 GOLGA6L22H0YM25 854 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 GH2P01242 217 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 PARP1P09874 1014 aaKnown RBP11.59□□□□□ -0.55
MRE11-210ENST00000541157 SNHG28P0DPA3 235 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
MRE11-210ENST00000541157 ICA1Q05084 483 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 FERMT3Q86UX7 667 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 LRRC47Q8N1G4 583 aaKnown RBP11.59□□□□□ -0.55
MRE11-210ENST00000541157 CCDC82Q8N4S0 544 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 MKL1Q969V6 931 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 AIFM3Q96NN9 605 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 ZSCAN16Q9H4T2 348 aaPredicted RBP11.59□□□□□ -0.55
MRE11-210ENST00000541157 CABP5Q9NP86 173 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 SYNPO2Q9UMS6 1093 aa11.59□□□□□ -0.55
MRE11-210ENST00000541157 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 UBE2Q2LH0YL09 131 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 PDHBP11177 359 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 PTMSP20962 102 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 SMARCA1P28370 1054 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 AKAP17AQ02040 695 aaKnown RBP11.58□□□□□ -0.56
MRE11-210ENST00000541157 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 TRIM29Q14134 588 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 PKN1Q16512 942 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 SLC35G1Q2M3R5 365 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 ASPRV1Q53RT3 343 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 KRT40Q6A162 431 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 MIGA2Q7L4E1 593 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 SIAH1Q8IUQ4 282 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 STAG2Q8N3U4 1231 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 KCTD12Q96CX2 325 aaKnown RBP11.58□□□□□ -0.56
MRE11-210ENST00000541157 HOOK2Q96ED9 719 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 CHAMP1Q96JM3 812 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 SPZ1Q9BXG8 430 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
MRE11-210ENST00000541157 SCAF8Q9UPN6 1271 aaKnown RBP11.58□□□□□ -0.56
MRE11-210ENST00000541157 V9GY48 417 aaPredicted RBP11.58□□□□□ -0.56
MRE11-210ENST00000541157 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 KLRF2D3W0D1 207 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 CAP2P40123 477 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 ATP2B2Q01814 1243 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 MCTP1Q6DN14 999 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 USP17L2Q6R6M4 530 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 RASGRP2Q7LDG7 609 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 GMCL1P1Q8NEA9 526 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 ZFRQ96KR1 1074 aaKnown RBP11.57□□□□□ -0.56
MRE11-210ENST00000541157 GJB4Q9NTQ9 266 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 GINM1Q9NU53 330 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 MTMR7Q9Y216 660 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 ADGRG1Q9Y653 693 aa11.57□□□□□ -0.56
MRE11-210ENST00000541157 SSC5DA1L4H1 1573 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 CYTH3O43739 400 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 GOLGA8HP0CJ92 632 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 SCG2P13521 617 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 KIF23Q02241 960 aaPredicted RBP11.56□□□□□ -0.56
MRE11-210ENST00000541157 DNM1Q05193 864 aaKnown RBP11.56□□□□□ -0.56
MRE11-210ENST00000541157 PFKFB3Q16875 520 aaPredicted RBP11.56□□□□□ -0.56
MRE11-210ENST00000541157 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
MRE11-210ENST00000541157 GPATCH4Q5T3I0 446 aaKnown RBP11.56□□□□□ -0.56
MRE11-210ENST00000541157 NBPF12Q5TAG4 269 aaPredicted RBP11.56□□□□□ -0.56
MRE11-210ENST00000541157 DCAF15Q66K64 600 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
MRE11-210ENST00000541157 DCAF4Q8WV16 495 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 WNT2BQ93097 391 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
MRE11-210ENST00000541157 MYH4Q9Y623 1939 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms