RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ZSWIM8A7E2V4 1837 aa5.83□□□□□ -1.48
SNHG1-214ENST00000540865 OTOFQ9HC10 1997 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 PIEZO1Q92508 2521 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 PFASO15067 1338 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 MAST3O60307 1309 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 SFI1A8K8P3 1242 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 SPINT1O43278 529 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 PLIN1O60240 522 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 MAN1A2O60476 641 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 PPFIA3O75145 1194 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 DKK1O94907 266 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 COL6A1P12109 1028 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 GYG1P46976 350 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 ATP1A2P50993 1020 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 FOXO4P98177 505 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 KRT76Q01546 638 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 PTK7Q13308 1070 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 GRIK5Q16478 980 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 FAM110CQ1W6H9 321 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 CCDC57Q2TAC2 916 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 TAF7LQ5H9L4 462 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 CCDC102BQ68D86 513 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 HHIPL2Q6UWX4 724 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 LDHAL6AQ6ZMR3 332 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 FBXO33Q7Z6M2 555 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 LINS1Q8NG48 757 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 SMCR8Q8TEV9 937 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-214ENST00000540865 FAM122AQ96E09 287 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 LBHD1Q9BQE6 289 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-214ENST00000540865 STK31Q9BXU1 1019 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 SEMA6BQ9H3T3 888 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 CNNM1Q9NRU3 951 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 SUGT1Q9Y2Z0 365 aa5.82□□□□□ -1.48
SNHG1-214ENST00000540865 COL2A1P02458 1487 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-214ENST00000540865 BDP1A6H8Y1 2624 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 DNAH12Q6ZR08 3092 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 FIGNL2A6NMB9 653 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 RNF225M0QZC1 329 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-214ENST00000540865 PTPRAP18433 802 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 DPYDQ12882 1025 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 CHAF1AQ13111 956 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-214ENST00000540865 CLN3Q13286 438 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 RALBP1Q15311 655 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 FOXD4L5Q5VV16 416 aaPredicted RBP5.81□□□□□ -1.48
SNHG1-214ENST00000540865 LMBR1LQ6UX01 489 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 GADL1Q6ZQY3 521 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 SCYL3Q8IZE3 742 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 ANKRD13CQ8N6S4 541 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 PICK1Q9NRD5 415 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 ZNF358Q9NW07 568 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 GJD2Q9UKL4 321 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 ZMIZ1Q9ULJ6 1067 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 NOVA2Q9UNW9 492 aaKnown RBP5.81□□□□□ -1.48
SNHG1-214ENST00000540865 CHMP3Q9Y3E7 222 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 AFG3L2Q9Y4W6 797 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 ZHX2Q9Y6X8 837 aa5.81□□□□□ -1.48
SNHG1-214ENST00000540865 CARNS1A5YM72 827 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 FAM196BA6NMK8 535 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 PHF20L1A8MW92 1017 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 FRAT2O75474 233 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-214ENST00000540865 FOSL2P15408 326 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 GCLCP48506 637 aaPredicted RBP5.8□□□□□ -1.48
SNHG1-214ENST00000540865 SMAD3P84022 425 aaKnown RBP5.8□□□□□ -1.48
SNHG1-214ENST00000540865 CENPCQ03188 943 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 WDR43Q15061 677 aaKnown RBP eCLIP5.8□□□□□ -1.48
SNHG1-214ENST00000540865 LRRC26Q2I0M4 334 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 CAVIN4Q5BKX8 364 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 G2E3Q7L622 706 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 VPS37DQ86XT2 251 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 ANKMY2Q8IV38 441 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 SIX5Q8N196 739 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 TSPYL6Q8N831 410 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 TSEN2Q8NCE0 465 aaKnown RBP5.8□□□□□ -1.48
SNHG1-214ENST00000540865 STK32AQ8WU08 396 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 DNAAF4Q8WXU2 420 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 MYLIPQ8WY64 445 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 XAGE2Q96GT9 111 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 ESYT1Q9BSJ8 1104 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 AGTPBP1Q9UPW5 1226 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 ECM29Q5VYK3 1845 aa5.8□□□□□ -1.48
SNHG1-214ENST00000540865 NCOR1O75376 2440 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 TMEM265A0A087WTH1 108 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 TTLL8A6PVC2 850 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 CTNND1O60716 968 aaKnown RBP5.79□□□□□ -1.48
SNHG1-214ENST00000540865 XRCC5P13010 732 aaKnown RBP5.79□□□□□ -1.48
SNHG1-214ENST00000540865 MAP3K10Q02779 954 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 TCP10Q12799 353 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 NFIAQ12857 509 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 TLR1Q15399 786 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 TBCELQ5QJ74 424 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 CDC42EP5Q6NZY7 148 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 RNF217Q8TC41 542 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 TRIB2Q92519 343 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 TTYH1Q9H313 450 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-214ENST00000540865 RAPGEFL1Q9UHV5 662 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 DNMT3LQ9UJW3 386 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 ADAMTS8Q9UP79 889 aa5.79□□□□□ -1.48
SNHG1-214ENST00000540865 IQSEC3Q9UPP2 1182 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-214ENST00000540865 HRH3Q9Y5N1 445 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms