RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 TRIM43BA6NCK2 446 aa19.39■□□□□ 0.69
TRIM65-203ENST00000540812 BADQ92934 168 aa19.39■□□□□ 0.69
TRIM65-203ENST00000540812 TRIM43Q96BQ3 446 aaPredicted RBP19.39■□□□□ 0.69
TRIM65-203ENST00000540812 PATL2C9JE40 543 aaKnown RBP19.38■□□□□ 0.69
TRIM65-203ENST00000540812 POTEB2H3BUK9 544 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 GNAT2P19087 354 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 SLC4A3P48751 1232 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 TLE2Q04725 743 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 SHHQ15465 462 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 C9orf50Q5SZB4 431 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 C1orf53Q5VUE5 145 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 CUL9Q8IWT3 2517 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 IFNL3Q8IZI9 196 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 ZNF444Q8N0Y2 327 aaPredicted RBP19.38■□□□□ 0.69
TRIM65-203ENST00000540812 CPXCR1Q8N123 301 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 LRRC47Q8N1G4 583 aaKnown RBP19.38■□□□□ 0.69
TRIM65-203ENST00000540812 PRPF38AQ8NAV1 312 aaKnown RBP19.38■□□□□ 0.69
TRIM65-203ENST00000540812 PI4K2BQ8TCG2 481 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 MKL1Q969V6 931 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 KIFC2Q96AC6 838 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 CDH23Q9H251 3354 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 MTMR4Q9NYA4 1195 aa19.38■□□□□ 0.69
TRIM65-203ENST00000540812 DNAJC25-GNG10A0A024R161 153 aa19.37■□□□□ 0.69
TRIM65-203ENST00000540812 DLL1O00548 723 aa19.37■□□□□ 0.69
TRIM65-203ENST00000540812 SNAI1O95863 264 aaPredicted RBP19.37■□□□□ 0.69
TRIM65-203ENST00000540812 AKR1A1P14550 325 aa19.37■□□□□ 0.69
TRIM65-203ENST00000540812 RNF180Q86T96 592 aa19.37■□□□□ 0.69
TRIM65-203ENST00000540812 GUCD1Q96NT3 240 aa19.37■□□□□ 0.69
TRIM65-203ENST00000540812 RAVER2Q9HCJ3 691 aaKnown RBP19.37■□□□□ 0.69
TRIM65-203ENST00000540812 TTC41PQ6P2S7 1318 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 MYH4Q9Y623 1939 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 ATP2A1O14983 1001 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 ADAMTS4O75173 837 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 ITGB8P26012 769 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 FAM109BQ6ICB4 259 aaPredicted RBP19.36■□□□□ 0.69
TRIM65-203ENST00000540812 DDX11Q96FC9 970 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 FAM161BQ96MY7 647 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 SLC38A10Q9HBR0 1119 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 ZNF287Q9HBT7 754 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 CNPY2Q9Y2B0 182 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 EYSQ5T1H1 3165 aa19.36■□□□□ 0.69
TRIM65-203ENST00000540812 PLIN4Q96Q06 1357 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 SYNGAP1Q96PV0 1343 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 A0A1W2PQ45 241 aaPredicted RBP19.35■□□□□ 0.69
TRIM65-203ENST00000540812 A0A1W2PQY0 241 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 ZBED4O75132 1171 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 TTLL1O95922 423 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 SLFN13Q68D06 897 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 MSL3Q8N5Y2 521 aaKnown RBP19.35■□□□□ 0.69
TRIM65-203ENST00000540812 NEDD1Q8NHV4 660 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 FGD4Q96M96 766 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 FEM1BQ9UK73 627 aa19.35■□□□□ 0.69
TRIM65-203ENST00000540812 ZHX1Q9UKY1 873 aaPredicted RBP19.35■□□□□ 0.69
TRIM65-203ENST00000540812 CTDP1Q9Y5B0 961 aaPredicted RBP19.35■□□□□ 0.69
TRIM65-203ENST00000540812 SYNRGQ9UMZ2 1314 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 ERC2O15083 957 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 PQBP1O60828 265 aaKnown RBP19.34■□□□□ 0.69
TRIM65-203ENST00000540812 LRRFIP1Q32MZ4 808 aaKnown RBP19.34■□□□□ 0.69
TRIM65-203ENST00000540812 ZMYM1Q5SVZ6 1142 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 MAMDC4Q6UXC1 1216 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.34■□□□□ 0.697e-7■■■□□ 16.7
TRIM65-203ENST00000540812 GMCL1P1Q8NEA9 526 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 CHMP4CQ96CF2 233 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 FSD1Q9BTV5 496 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 NACAP1Q9BZK3 213 aa19.34■□□□□ 0.69
TRIM65-203ENST00000540812 MYADML2A6NDP7 307 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 CLTBP09497 229 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 TSPY3P0CV98 308 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 TSPY8P0CW00 308 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 BMP3P12645 472 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 IRX5P78411 483 aaPredicted RBP19.33■□□□□ 0.68
TRIM65-203ENST00000540812 TFAP4Q01664 338 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 PDE4BQ07343 736 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 PPARAQ07869 468 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 KLHDC9Q8NEP7 349 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 NAPBQ9H115 298 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 FAM184BQ9ULE4 1060 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 TACC3Q9Y6A5 838 aa19.33■□□□□ 0.68
TRIM65-203ENST00000540812 FOXP2O15409 715 aa19.32■□□□□ 0.68
TRIM65-203ENST00000540812 ADCY6O43306 1168 aa19.32■□□□□ 0.68
TRIM65-203ENST00000540812 EPHB4P54760 987 aa19.32■□□□□ 0.68
TRIM65-203ENST00000540812 CCDC129Q6ZRS4 1044 aa19.32■□□□□ 0.68
TRIM65-203ENST00000540812 ZNF467Q7Z7K2 595 aaPredicted RBP19.32■□□□□ 0.68
TRIM65-203ENST00000540812 ANKRD35Q8N283 1001 aa19.32■□□□□ 0.68
TRIM65-203ENST00000540812 TSEN34Q9BSV6 310 aaKnown RBP19.32■□□□□ 0.68
TRIM65-203ENST00000540812 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.32■□□□□ 0.68
TRIM65-203ENST00000540812 SYNPO2Q9UMS6 1093 aa19.32■□□□□ 0.68
TRIM65-203ENST00000540812 TMEM232C9JQI7 657 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 KIAA0355O15063 1070 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 MX1P20591 662 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 ACLYP53396 1101 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 OAZ1P54368 228 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 ACVR2BQ13705 512 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 ZNF697Q5TEC3 545 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 CCSAPQ6IQ19 270 aaPredicted RBP19.31■□□□□ 0.68
TRIM65-203ENST00000540812 CHST13Q8NET6 341 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 INCENPQ9NQS7 918 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 STARD7Q9NQZ5 370 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
TRIM65-203ENST00000540812 VCANP13611 3396 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms