RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 POLR2AP24928 1970 aaKnown RBP28.2■■■□□ 2.11
TTC3-225ENST00000540756 USP17L10C9JJH3 530 aa28.19■■■□□ 2.1
TTC3-225ENST00000540756 GPATCH4Q5T3I0 446 aaKnown RBP28.19■■■□□ 2.1
TTC3-225ENST00000540756 CCDC183Q5T5S1 534 aa28.19■■■□□ 2.1
TTC3-225ENST00000540756 SYAP1Q96A49 352 aaPredicted RBP28.19■■■□□ 2.1
TTC3-225ENST00000540756 RILPL1Q5EBL4 403 aa28.19■■■□□ 2.1
TTC3-225ENST00000540756 BLIDQ8IZY5 108 aa28.19■■■□□ 2.1
TTC3-225ENST00000540756 GLIS2Q9BZE0 524 aaPredicted RBP28.19■■■□□ 2.1
TTC3-225ENST00000540756 PCDHA4Q9UN74 947 aa28.19■■■□□ 2.1
TTC3-225ENST00000540756 AXDND1Q5T1B0 1012 aaPredicted RBP28.18■■■□□ 2.1
TTC3-225ENST00000540756 PIK3AP1Q6ZUJ8 805 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 GMCL1P1Q8NEA9 526 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 MRVI1Q9Y6F6 885 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 PPP1R11O60927 126 aaPredicted RBP28.18■■■□□ 2.1
TTC3-225ENST00000540756 NAPAP54920 295 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 ADALQ6DHV7 355 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 DCAF4Q8WV16 495 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 COA7Q96BR5 231 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 FZD1Q9UP38 647 aa28.18■■■□□ 2.1
TTC3-225ENST00000540756 GOLGA6L3A6NEY3 463 aa28.17■■■□□ 2.1
TTC3-225ENST00000540756 M0R2N6 131 aa28.17■■■□□ 2.1
TTC3-225ENST00000540756 CAMK4Q16566 473 aa28.17■■■□□ 2.1
TTC3-225ENST00000540756 GGA3Q9NZ52 723 aa28.17■■■□□ 2.1
TTC3-225ENST00000540756 ATAD5Q96QE3 1844 aa28.17■■■□□ 2.1
TTC3-225ENST00000540756 CALML3P27482 149 aa28.16■■■□□ 2.1
TTC3-225ENST00000540756 FSIP1Q8NA03 581 aa28.16■■■□□ 2.1
TTC3-225ENST00000540756 CLIC6Q96NY7 704 aa28.16■■■□□ 2.1
TTC3-225ENST00000540756 A0A1B0GVL5 298 aa28.15■■■□□ 2.1
TTC3-225ENST00000540756 CCDC148Q8NFR7 591 aa28.15■■■□□ 2.1
TTC3-225ENST00000540756 PCDHA6Q9UN73 950 aa28.15■■■□□ 2.1
TTC3-225ENST00000540756 PCDHA8Q9Y5H6 950 aa28.15■■■□□ 2.1
TTC3-225ENST00000540756 SNAP25P60880 206 aa28.14■■■□□ 2.1
TTC3-225ENST00000540756 SNW1Q13573 536 aaKnown RBP28.14■■■□□ 2.1
TTC3-225ENST00000540756 ZYXQ15942 572 aaKnown RBP28.14■■■□□ 2.1
TTC3-225ENST00000540756 GMCL1Q96IK5 515 aa28.14■■■□□ 2.1
TTC3-225ENST00000540756 ZMYND12Q9H0C1 365 aa28.14■■■□□ 2.1
TTC3-225ENST00000540756 ARHGEF10LQ9HCE6 1279 aa28.14■■■□□ 2.1
TTC3-225ENST00000540756 TMX2Q9Y320 296 aa28.14■■■□□ 2.1
TTC3-225ENST00000540756 SMCO2A6NFE2 343 aa28.14■■■□□ 2.09
TTC3-225ENST00000540756 DLK2Q6UY11 383 aa28.14■■■□□ 2.09
TTC3-225ENST00000540756 GRIN1Q05586 938 aa28.13■■■□□ 2.09
TTC3-225ENST00000540756 LRSAM1Q6UWE0 723 aa28.13■■■□□ 2.09
TTC3-225ENST00000540756 MTMR8Q96EF0 704 aa28.13■■■□□ 2.09
TTC3-225ENST00000540756 PNMA6FA0A0J9YX94 578 aa28.13■■■□□ 2.09
TTC3-225ENST00000540756 PPP6R2O75170 966 aa28.13■■■□□ 2.09
TTC3-225ENST00000540756 ZNF174Q15697 407 aa28.13■■■□□ 2.09
TTC3-225ENST00000540756 ENGASEQ8NFI3 743 aa28.13■■■□□ 2.09
TTC3-225ENST00000540756 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.13■■■□□ 2.09
TTC3-225ENST00000540756 TMEM232C9JQI7 657 aa28.12■■■□□ 2.09
TTC3-225ENST00000540756 NDUFA8P51970 172 aa28.12■■■□□ 2.09
TTC3-225ENST00000540756 DAGLBQ8NCG7 672 aa28.12■■■□□ 2.09
TTC3-225ENST00000540756 MRPS27Q92552 414 aaKnown RBP28.12■■■□□ 2.09
TTC3-225ENST00000540756 A0A1W2PQ27 194 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 A0A1W2PQ64 194 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 A0A1W2PQD8 194 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 TRIM75PA6NK02 468 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 ZBTB5O15062 677 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 ASNSP08243 561 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 BMP3P12645 472 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 INPP5BP32019 993 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 SHC4Q6S5L8 630 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 APOBEC3FQ8IUX4 373 aaKnown RBP28.11■■■□□ 2.09
TTC3-225ENST00000540756 NUP62CLQ9H1M0 184 aa28.11■■■□□ 2.09
TTC3-225ENST00000540756 QRICH1Q2TAL8 776 aa28.1■■■□□ 2.09
TTC3-225ENST00000540756 SPECC1Q5M775 1068 aa28.1■■■□□ 2.09
TTC3-225ENST00000540756 GPR162Q16538 588 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 TTC38Q5R3I4 469 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 CCDC73Q6ZRK6 1079 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 FBXO2Q9UK22 296 aaPredicted RBP28.09■■■□□ 2.09
TTC3-225ENST00000540756 NOL7Q9UMY1 257 aaKnown RBP28.09■■■□□ 2.09
TTC3-225ENST00000540756 FAM160A1Q05DH4 1040 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 IKQ13123 557 aaPredicted RBP28.09■■■□□ 2.09
TTC3-225ENST00000540756 FAM83BQ5T0W9 1011 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 GALNT17Q6IS24 598 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 CKAP2LQ8IYA6 745 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 CCDC12Q8WUD4 166 aaPredicted RBP28.09■■■□□ 2.09
TTC3-225ENST00000540756 CLSTN2Q9H4D0 955 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 DDX19AQ9NUU7 478 aaKnown RBP28.09■■■□□ 2.09
TTC3-225ENST00000540756 TMEM260Q9NX78 707 aa28.09■■■□□ 2.09
TTC3-225ENST00000540756 SMCHD1A6NHR9 2005 aa28.08■■■□□ 2.09
TTC3-225ENST00000540756 TAL1P17542 331 aaPredicted RBP28.08■■■□□ 2.09
TTC3-225ENST00000540756 DGKZQ13574 1117 aa28.08■■■□□ 2.09
TTC3-225ENST00000540756 CDC37Q16543 378 aaPredicted RBP28.08■■■□□ 2.09
TTC3-225ENST00000540756 FMR1NBQ8N0W7 255 aaPredicted RBP28.08■■■□□ 2.09
TTC3-225ENST00000540756 JMYQ8N9B5 988 aa28.08■■■□□ 2.09
TTC3-225ENST00000540756 C6orf50Q9HD87 102 aa28.08■■■□□ 2.09
TTC3-225ENST00000540756 BIN2Q9UBW5 565 aaPredicted RBP28.08■■■□□ 2.09
TTC3-225ENST00000540756 CMA1P23946 247 aa28.08■■■□□ 2.08
TTC3-225ENST00000540756 LMOD1P29536 600 aaPredicted RBP28.08■■■□□ 2.08
TTC3-225ENST00000540756 INF2Q27J81 1249 aa28.08■■■□□ 2.08
TTC3-225ENST00000540756 KRI1Q8N9T8 703 aaKnown RBP28.08■■■□□ 2.08
TTC3-225ENST00000540756 ZNF341Q9BYN7 854 aa28.08■■■□□ 2.08
TTC3-225ENST00000540756 RBSNQ9H1K0 784 aa28.08■■■□□ 2.08
TTC3-225ENST00000540756 GRPEL1Q9HAV7 217 aa28.08■■■□□ 2.08
TTC3-225ENST00000540756 GOPCQ9HD26 462 aa28.08■■■□□ 2.08
TTC3-225ENST00000540756 SYNPO2Q9UMS6 1093 aa28.08■■■□□ 2.08
TTC3-225ENST00000540756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.07■■■□□ 2.08
TTC3-225ENST00000540756 CCDC194A0A1B0GVG4 234 aa28.07■■■□□ 2.08
TTC3-225ENST00000540756 PFKFB1P16118 471 aa28.07■■■□□ 2.08
TTC3-225ENST00000540756 ZKSCAN4Q969J2 545 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms