RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 SLC7A3Q8WY07 619 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 MTFR1LQ9H019 292 aa15.83■□□□□ 0.12
COLCA1-204ENST00000540738 CPDO75976 1380 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 MLKLQ8NB16 471 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 DCAF4Q8WV16 495 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 CWC15Q9P013 229 aaKnown RBP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 CD2APQ9Y5K6 639 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 ATP2A1O14983 1001 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 GH2P01242 217 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 SEPT14Q6ZU15 432 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 GPBP1Q86WP2 473 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 BBXQ8WY36 941 aaPredicted RBP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 GPKOWQ92917 476 aaPredicted RBP eCLIP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 MAP4K1Q92918 833 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 MRPS9P82933 396 aaKnown RBP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 TBC1D8BQ0IIM8 1120 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 DMP1Q13316 513 aaPredicted RBP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 CCDC113Q9H0I3 377 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 ANTXR1Q9H6X2 564 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 CTNND2Q9UQB3 1225 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 GOLGA6L7A0A1B0GV03 622 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 TNNC2P02585 160 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 FDX1P10109 184 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 TNNI1P19237 187 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 IGBP1P78318 339 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 PLCB3Q01970 1234 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 PAK1Q13153 545 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 LRCH2Q5VUJ6 765 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 LINC00116Q8NCU8 138 aa15.82■□□□□ 0.12
COLCA1-204ENST00000540738 MAK16Q9BXY0 300 aaKnown RBP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.82■□□□□ 0.12
COLCA1-204ENST00000540738 TNFAIP3P21580 790 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 ABCD1P33897 745 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 LEKR1Q6ZMV7 388 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
COLCA1-204ENST00000540738 CCDC50Q8IVM0 306 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 ZSWIM6Q9HCJ5 1215 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 COL4A3BPQ9Y5P4 624 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 USP17L10C9JJH3 530 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 LAD1O00515 517 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 TRIM14Q14142 442 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 STRIP1Q5VSL9 837 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 CNGA4Q8IV77 575 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 PIH1D3Q9NQM4 214 aaKnown RBP15.81■□□□□ 0.12
COLCA1-204ENST00000540738 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
COLCA1-204ENST00000540738 ZNF577Q9BSK1 485 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 MROH7-TTC4A0A0A0MT08 1334 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 H0YHG0 523 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 M0R2C6 588 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 GNA14O95837 355 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 TRAPPC10P48553 1259 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 SF3B3Q15393 1217 aaKnown RBP15.81■□□□□ 0.12
COLCA1-204ENST00000540738 PI16Q6UXB8 463 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 DGKHQ86XP1 1220 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 CCDC102AQ96A19 550 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 HERC5Q9UII4 1024 aaKnown RBP15.81■□□□□ 0.12
COLCA1-204ENST00000540738 PNPLA6Q8IY17 1366 aa15.81■□□□□ 0.12
COLCA1-204ENST00000540738 NRKQ7Z2Y5 1582 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 BCRP11274 1271 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 CD19P15391 556 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 SPECC1Q5M775 1068 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 MYSM1Q5VVJ2 828 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 ELMSAN1Q6PJG2 1045 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 OTUD6BQ8N6M0 293 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 TRMT1Q9NXH9 659 aaKnown RBP15.8■□□□□ 0.12
COLCA1-204ENST00000540738 GAS8O95995 478 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 MTX1Q13505 466 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 SNW1Q13573 536 aaKnown RBP15.8■□□□□ 0.12
COLCA1-204ENST00000540738 SREK1Q8WXA9 508 aaKnown RBP15.8■□□□□ 0.12
COLCA1-204ENST00000540738 UIMC1Q96RL1 719 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 SPATA31D1Q6ZQQ2 1576 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 PRKAB2O43741 272 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 PTGS1P23219 599 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 GNG11P61952 73 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 SLF1Q9BQI6 1058 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 CNOT7Q9UIV1 285 aaKnown RBP15.8■□□□□ 0.12
COLCA1-204ENST00000540738 FEM1BQ9UK73 627 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 TECPR2O15040 1411 aa15.8■□□□□ 0.12
COLCA1-204ENST00000540738 RPS12P25398 132 aaKnown RBP15.8■□□□□ 0.12
COLCA1-204ENST00000540738 ARHGEF37A1IGU5 675 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 LRRIQ4A6NIV6 560 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 JAK2O60674 1132 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 ZSCAN20P17040 1043 aaPredicted RBP15.79■□□□□ 0.12
COLCA1-204ENST00000540738 CMTR1Q8N1G2 835 aaKnown RBP15.79■□□□□ 0.12
COLCA1-204ENST00000540738 TECP42680 631 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 FAM178BQ8IXR5 827 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
COLCA1-204ENST00000540738 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 TMEM110-MUSTN1A8MSY1 372 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 NBPF26B4DH59 902 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 SORBS3O60504 671 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 CCDC175P0C221 793 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
COLCA1-204ENST00000540738 NBPF10Q6P3W6 841 aaKnown RBP15.79■□□□□ 0.12
COLCA1-204ENST00000540738 GSTA5Q7RTV2 222 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms