RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 PBX2P40425 430 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 RGS2P41220 211 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 ERVK-24P63145 666 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 IRX3P78415 501 aaPredicted RBP13.55□□□□□ -0.24
TMEM258-205ENST00000540434 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 TBC1D10CQ8IV04 446 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 KIAA1683Q9H0B3 1180 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 MKNK2Q9HBH9 465 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 IL17RBQ9NRM6 502 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
TMEM258-205ENST00000540434 DDX20Q9UHI6 824 aaKnown RBP13.55□□□□□ -0.24
TMEM258-205ENST00000540434 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 FAM86C2PA6NEL3 165 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 GRXCR1A8MXD5 290 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 IGHA2P01877 340 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-205ENST00000540434 TFAP4Q01664 338 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 TFF2Q03403 129 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 AMOTL1Q8IY63 956 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 IL27Q8NEV9 243 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 LPAR1Q92633 364 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 FERMT2Q96AC1 680 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 TIFAQ96CG3 184 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 C12orf42Q96LP6 360 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 GAS2L1Q99501 681 aaPredicted RBP13.54□□□□□ -0.24
TMEM258-205ENST00000540434 APBA2Q99767 749 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
TMEM258-205ENST00000540434 HIP1O00291 1037 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 DNM1LO00429 736 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 SGSM2O43147 1006 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 BMP1P13497 986 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 VCAM1P19320 739 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 ICA1Q05084 483 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 COL9A3Q14050 684 aaPredicted RBP13.53□□□□□ -0.24
TMEM258-205ENST00000540434 SPICE1Q8N0Z3 855 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 CEP95Q96GE4 821 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 ARIH1Q9Y4X5 557 aaPredicted RBP13.53□□□□□ -0.24
TMEM258-205ENST00000540434 PIEZO1Q92508 2521 aa13.53□□□□□ -0.24
TMEM258-205ENST00000540434 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.52□□□□□ -0.25
TMEM258-205ENST00000540434 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.52□□□□□ -0.25
TMEM258-205ENST00000540434 CNMDO75829 334 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 IGFBP4P22692 258 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 CYP2C19P33261 490 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 KCNQ1P51787 676 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 ATP2B2Q01814 1243 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 SNX17Q15036 470 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 CATSPERGQ6ZRH7 1159 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 ZNF444Q8N0Y2 327 aaPredicted RBP13.52□□□□□ -0.25
TMEM258-205ENST00000540434 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
TMEM258-205ENST00000540434 CHMP4CQ96CF2 233 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.25
TMEM258-205ENST00000540434 FEZ1Q99689 392 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 TMOD4Q9NZQ9 345 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 NEDD4P46934 1319 aa13.52□□□□□ -0.25
TMEM258-205ENST00000540434 MUC6Q6W4X9 2439 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 ZMYM6O95789 1325 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 AKNAD1Q5T1N1 836 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 RPAP3Q9H6T3 665 aaPredicted RBP13.51□□□□□ -0.25
TMEM258-205ENST00000540434 VCPKMTQ9H867 229 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 KANSL2Q9H9L4 492 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 C11orf16Q9NQ32 467 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 CLIP2Q9UDT6 1046 aa13.51□□□□□ -0.25
TMEM258-205ENST00000540434 LAMA4Q16363 1823 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 PARP14Q460N5 1801 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 CHD7Q9P2D1 2997 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 ORC4O43929 436 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 MSCO60682 206 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 HOXC6P09630 235 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 ADCYAP1R1P41586 468 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 TLE2Q04725 743 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 PDE4BQ07343 736 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
TMEM258-205ENST00000540434 TMEM31Q5JXX7 168 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 MFSD14CQ5VZR4 134 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 NPLOC4Q8TAT6 608 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 MKL1Q969V6 931 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 ESYT1Q9BSJ8 1104 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 PBX4Q9BYU1 374 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 LSG1Q9H089 658 aaKnown RBP13.5□□□□□ -0.25
TMEM258-205ENST00000540434 FBXO28Q9NVF7 368 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 ZNFX1Q9P2E3 1918 aaKnown RBP13.5□□□□□ -0.25
TMEM258-205ENST00000540434 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
TMEM258-205ENST00000540434 PLIN4Q96Q06 1357 aa13.49□□□□□ -0.25
TMEM258-205ENST00000540434 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms