RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 KLRC3Q07444 240 aa17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 DIS3Q9Y2L1 958 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 LCTP09848 1927 aa17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 IGKV6D-41A0A0C4DH26 115 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 RNF113AO15541 343 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 GPAA1O43292 621 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 PQBP1O60828 265 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 ADAMTS4O75173 837 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 SNAI1O95863 264 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 APPBP2Q92624 585 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 CHMP4CQ96CF2 233 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 RAVER2Q9HCJ3 691 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 NYAP2Q9P242 653 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 NRBP1Q9UHY1 535 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 LRRC37A2A6NM11 1700 aa17.04■□□□□ 0.32
SEMA4D-222ENST00000540183 SYNRGQ9UMZ2 1314 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 MYADML2A6NDP7 307 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 ADCY6O43306 1168 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 AKR1A1P14550 325 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 RNF180Q86T96 592 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 KIFC2Q96AC6 838 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 FGD4Q96M96 766 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 TEX13BQ9BXU2 312 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 TTYH1Q9H313 450 aaPredicted RBP17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 GBF1Q92538 1859 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 VCANP13611 3396 aa17.03■□□□□ 0.32
SEMA4D-222ENST00000540183 DNAJC25-GNG10A0A024R161 153 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 CLTBP09497 229 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 COPB2P35606 906 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 TDO2P48775 406 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 DDX11Q96FC9 970 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 CDX2Q99626 313 aaPredicted RBP17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 SEMA6BQ9H3T3 888 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 CNPY2Q9Y2B0 182 aa17.02■□□□□ 0.32
SEMA4D-222ENST00000540183 APPP05067 770 aa17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 ACLYP53396 1101 aa17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 GIMAP6Q6P9H5 292 aa17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 PRPF38AQ8NAV1 312 aaKnown RBP17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 OTUD7AQ8TE49 926 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 COL25A1Q9BXS0 654 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 TACC3Q9Y6A5 838 aa17.01■□□□□ 0.31
SEMA4D-222ENST00000540183 KIAA0355O15063 1070 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 ZBED4O75132 1171 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 FAAP100Q0VG06 881 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 MYO9BQ13459 2157 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 KCNA10Q16322 511 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 IFNL3Q8IZI9 196 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 KLHDC9Q8NEP7 349 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 MYLIPQ8WY64 445 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 SLC38A10Q9HBR0 1119 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 MTMR4Q9NYA4 1195 aa17■□□□□ 0.31
SEMA4D-222ENST00000540183 SYNGAP1Q96PV0 1343 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 RAG1P15918 1043 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 CCSAPQ6IQ19 270 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 MAMDC4Q6UXC1 1216 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 MKL1Q969V6 931 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 STARD7Q9NQZ5 370 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 HOMER2Q9NSB8 354 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 TMEM39AQ9NV64 488 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 FAM184BQ9ULE4 1060 aa16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 DDX49Q9Y6V7 483 aaKnown RBP16.99■□□□□ 0.31
SEMA4D-222ENST00000540183 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 ATP2A1O14983 1001 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 CNTN2Q02246 1040 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 ACVR2BQ13705 512 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 ANKRD35Q8N283 1001 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 PI4K2BQ8TCG2 481 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 RNPC3Q96LT9 517 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 TSEN34Q9BSV6 310 aaKnown RBP16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 INCENPQ9NQS7 918 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 FEM1BQ9UK73 627 aa16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 CTDP1Q9Y5B0 961 aaPredicted RBP16.98■□□□□ 0.31
SEMA4D-222ENST00000540183 TTLL1O95922 423 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 C6orf222P0C671 652 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 BMP3P12645 472 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 GNAT2P19087 354 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 PTGS1P23219 599 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 SNAP25P60880 206 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 FPGSQ05932 587 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 CCDC144BQ3MJ40 725 aa16.97■□□□□ 0.31
SEMA4D-222ENST00000540183 ARMCX2Q7L311 632 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms