RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CAP1Q01518 475 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 SP3Q02447 781 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 FAM110CQ1W6H9 321 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 IFIT1BQ5T764 474 aaKnown RBP8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 SLFN13Q68D06 897 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 CHST3Q7LGC8 479 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 IFNLR1Q8IU57 520 aaPredicted RBP8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 ANKRD13CQ8N6S4 541 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 PNMA1Q8ND90 353 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 GTF3C2Q8WUA4 911 aaPredicted RBP8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 DCAF4Q8WV16 495 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 NEK1Q96PY6 1258 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 MTA3Q9BTC8 594 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 OCEL1Q9H607 264 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 KAT14Q9H8E8 782 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 SENP2Q9HC62 589 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 TXNRD2Q9NNW7 524 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 PRDM10Q9NQV6 1147 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 FBXO28Q9NVF7 368 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 MORF4L1Q9UBU8 362 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 WDR19Q8NEZ3 1342 aa8.19□□□□□ -1.1
LPCAT3-209ENST00000540060 LRRC37A2A6NM11 1700 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 ERICH2A1L162 156 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 SH2B2O14492 632 aaPredicted RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 IFIT3O14879 490 aaKnown RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 PEX10O60683 326 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 EIF5BO60841 1220 aaKnown RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 MCCP23508 829 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 SLC1A4P43007 532 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 STAT2P52630 851 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 LACTBP83111 547 aaPredicted RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 EXOSC10Q01780 885 aaKnown RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 COG2Q14746 738 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 WTAPQ15007 396 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 SART3Q15020 963 aaKnown RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 KCTD1Q719H9 257 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 IGDCC4Q8TDY8 1250 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 ATG4CQ96DT6 458 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 TMEM87BQ96K49 555 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 JAKMIP1Q96N16 626 aaKnown RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 LY9Q9HBG7 655 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 GPHNQ9NQX3 736 aaPredicted RBP8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 RBPJLQ9UBG7 517 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 ADAMTS5Q9UNA0 930 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 MTMR7Q9Y216 660 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 RABGAP1Q9Y3P9 1069 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 SMCHD1A6NHR9 2005 aa8.18□□□□□ -1.1
LPCAT3-209ENST00000540060 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 VWA5AO00534 786 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 PLA2G6O60733 806 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 HMGB1P09429 215 aaKnown RBP8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 CPA1P15085 419 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 CTGFP29279 349 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 LIFRP42702 1097 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 ERVK-9P63128 1117 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 ERVK-24P63145 666 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 ZNF543Q08ER8 600 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 CCDC96Q2M329 555 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 DHX32Q7L7V1 743 aaKnown RBP8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 MB21D1Q8N884 522 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 CD99L2Q8TCZ2 262 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 CHMP4CQ96CF2 233 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 IL17RAQ96F46 866 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 ERO1AQ96HE7 468 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 TCEANC2Q96MN5 208 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 PAGR1Q9BTK6 254 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 LRRC2Q9BYS8 371 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 ARHGAP39Q9C0H5 1083 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 HOXC10Q9NYD6 342 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 BTBD7Q9P203 1132 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 FEM1BQ9UK73 627 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 FRMPD2Q68DX3 1309 aaPredicted RBP8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 FRMPD3Q5JV73 1810 aa8.17□□□□□ -1.1
LPCAT3-209ENST00000540060 DDAH1O94760 285 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 GOLGA8HP0CJ92 632 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 CASTP20810 708 aaKnown RBP8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 RPS6KB1P23443 525 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 PSMA5P28066 241 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 ANAPC15P60006 121 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 TROAPQ12815 778 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 TMEM132BQ14DG7 1078 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 Q3C1V9 767 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 ASPRV1Q53RT3 343 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 GPATCH4Q5T3I0 446 aaKnown RBP8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 BLOC1S2Q6QNY1 142 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 BTNL9Q6UXG8 535 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 FAM160B2Q86V87 743 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 SGMS1Q86VZ5 419 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 ZNF654Q8IZM8 581 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 PRPF38AQ8NAV1 312 aaKnown RBP8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 GPRC5AQ8NFJ5 357 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 KIFC2Q96AC6 838 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 TRIM47Q96LD4 638 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 TM6SF1Q9BZW5 370 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 PORCNQ9H237 461 aa8.16□□□□□ -1.1
LPCAT3-209ENST00000540060 SLC38A10Q9HBR0 1119 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms