RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 IKQ13123 557 aaPredicted RBP15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ZNF589Q86UQ0 364 aaPredicted RBP15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PLEKHM2Q8IWE5 1019 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 RAVER2Q9HCJ3 691 aaKnown RBP15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 STX8Q9UNK0 236 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 MTMR7Q9Y216 660 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 TACC3Q9Y6A5 838 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 FRMPD3Q5JV73 1810 aa15.12■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 TMEM232C9JQI7 657 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 MSCO60682 206 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 BMP3P12645 472 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 COPB2P35606 906 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 RRP12Q5JTH9 1297 aaKnown RBP15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 GMCL1P1Q8NEA9 526 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 TEX13BQ9BXU2 312 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 SENP6Q9GZR1 1112 aaPredicted RBP15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 FEM1BQ9UK73 627 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 RIPK3Q9Y572 518 aa15.11■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 IGHA2P01877 340 aa15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 FGAP02671 866 aa15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 HSPD1P10809 573 aaKnown RBP15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 HAND2P61296 217 aa15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ALX1Q15699 326 aa15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 GJC2Q5T442 439 aaPredicted RBP15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ANAPC4Q9UJX5 808 aa15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 CCDC171Q6TFL3 1326 aa15.1■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 COL6A1P12109 1028 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 SDSP20132 328 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 MCCP23508 829 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 SLC1A4P43007 532 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 LRRC26Q2I0M4 334 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ZNF792Q3KQV3 632 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 PPP4R3BQ5MIZ7 849 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 RASGRP2Q7LDG7 609 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 DDX11Q96FC9 970 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 IL17RBQ9NRM6 502 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 HOMER2Q9NSB8 354 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 SYNPO2Q9UMS6 1093 aa15.09■□□□□ 0.01
TSPAN9-IT1-201ENST00000539784 ZNFX1Q9P2E3 1918 aaKnown RBP15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 SEPT4O43236 478 aa15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 STAT2P52630 851 aa15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 ATN1P54259 1190 aaPredicted RBP15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 CCDC96Q2M329 555 aa15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 KCTD1Q719H9 257 aa15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 TINF2Q9BSI4 451 aa15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 SLC38A10Q9HBR0 1119 aa15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 DIAPH3Q9NSV4 1193 aa15.08■□□□□ 0
TSPAN9-IT1-201ENST00000539784 KBTBD13C9JR72 458 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 DNM1LO00429 736 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 ORC4O43929 436 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 TAL1P17542 331 aaPredicted RBP15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 MFAP1P55081 439 aaKnown RBP15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 SNAP25P60880 206 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 CWC27Q6UX04 472 aaKnown RBP15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 FAM160B2Q86V87 743 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 ARRDC4Q8NCT1 418 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 CHURC1Q8WUH1 139 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 GMCL1Q96IK5 515 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 PLXNA1Q9UIW2 1896 aa15.07■□□□□ 0
TSPAN9-IT1-201ENST00000539784 ATP2A1O14983 1001 aa15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 CCDC174Q6PII3 467 aa15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 TICAM2Q86XR7 235 aa15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 ANKRD35Q8N283 1001 aa15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 STAG1Q8WVM7 1258 aa15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 PRO3102Q9H379 93 aa15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 DIS3Q9Y2L1 958 aaKnown RBP15.06■□□□□ 0
TSPAN9-IT1-201ENST00000539784 OAZ1P54368 228 aa15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 RCSD1Q6JBY9 416 aa15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 MFSD6Q6ZSS7 791 aa15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 TBC1D10CQ8IV04 446 aa15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 LENG1Q96BZ8 264 aaPredicted RBP15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 AGBL1Q96MI9 1066 aa15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 FBXO40Q9UH90 709 aa15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 ZMYM6O95789 1325 aa15.05■□□□□ -0
TSPAN9-IT1-201ENST00000539784 CEP290O15078 2479 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 FRMPD2Q68DX3 1309 aaPredicted RBP15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 FGRP09769 529 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 FDX1P10109 184 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 RARBP10826 455 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 ALAS1P13196 640 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 MAGEA10P43363 369 aaPredicted RBP15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 LRRC41Q15345 812 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 AKNAD1Q5T1N1 836 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 CHST13Q8NET6 341 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 FERMT2Q96AC1 680 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 TMEM47Q9BQJ4 181 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 XPNPEP3Q9NQH7 507 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 RNF146Q9NTX7 359 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 NRBP1Q9UHY1 535 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 ZHX1Q9UKY1 873 aaPredicted RBP15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 ATP11BQ9Y2G3 1177 aa15.04■□□□□ -0
TSPAN9-IT1-201ENST00000539784 NEDD4P46934 1319 aa15.03■□□□□ -0
TSPAN9-IT1-201ENST00000539784 DNAJC25-GNG10A0A024R161 153 aa15.03■□□□□ -0
TSPAN9-IT1-201ENST00000539784 HIP1O00291 1037 aa15.03■□□□□ -0
TSPAN9-IT1-201ENST00000539784 ZNF213O14771 459 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms