RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 VCX3BQ9H321 246 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 ZNF408Q9H9D4 720 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 GADD45BO75293 160 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 HSPD1P10809 573 aaKnown RBP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 SCG2P13521 617 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 DMP1Q13316 513 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 ASPRV1Q53RT3 343 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 SND1Q7KZF4 910 aaKnown RBP eCLIP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 FANCBQ8NB91 859 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 USP44Q9H0E7 712 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 PFDN4Q9NQP4 134 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 MAPK8IP2Q13387 824 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 KRT81Q14533 505 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 UBE3CQ15386 1083 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 WHAMMP3Q1A5X7 153 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 FAM102BQ5T8I3 360 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 CCDC17Q96LX7 622 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 ADPGKQ9BRR6 497 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 MLXIPQ9HAP2 919 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 COL4A3BPQ9Y5P4 624 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 TACC3Q9Y6A5 838 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 ATF7P17544 494 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 ARHGAP44Q17R89 818 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 LONRF2Q1L5Z9 754 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 TMC4Q7Z404 712 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 BLZF1Q9H2G9 400 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 VCXQ9H320 206 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 LAMC1P11047 1609 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 GTPBP6O43824 516 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 CD19P15391 556 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 BAG6P46379 1132 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 SLC12A2P55011 1212 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 BRD3Q15059 726 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 NSMFQ6X4W1 530 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 RNF123Q5XPI4 1314 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 KLRF2D3W0D1 207 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 FOSP01100 380 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 IRX4P78413 519 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 SMCR8Q8TEV9 937 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 EPSTI1Q96J88 318 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 AK8Q96MA6 479 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 FRMPD2Q68DX3 1309 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 CDC42BPGQ6DT37 1551 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 QRICH2Q9H0J4 1663 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PSDA5PKW4 1024 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PPP6R2O75170 966 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 RPN1P04843 607 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PDE6AP16499 860 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PDZD4Q76G19 769 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 FAM178BQ8IXR5 827 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 LMNTD2Q8IXW0 634 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 CSRNP1Q96S65 589 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 SLF1Q9BQI6 1058 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 BZW2Q9Y6E2 419 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 NLRP1Q9C000 1473 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PFKFB1P16118 471 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 TMOD1P28289 359 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PALM2Q8IXS6 379 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 CNKSR1Q969H4 720 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 FOXP1Q9H334 677 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 CACYBPQ9HB71 228 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 GINS2Q9Y248 185 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 RGS12O14924 1447 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 FGAP02671 866 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 OTUD7BQ6GQQ9 843 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 DPY19L2Q6NUT2 758 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 EXOC8Q8IYI6 725 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 RAB3IPQ96QF0 476 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 MED10Q9BTT4 135 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 RAB20Q9NX57 234 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 UGGT1Q9NYU2 1555 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PDE6CP51160 858 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 ZNF131P52739 623 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 AOC3Q16853 763 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 SH2D4BQ5SQS7 431 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 GPATCH4Q5T3I0 446 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 FAM160B1Q5W0V3 765 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 FAM173BQ6P4H8 233 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PHLDB2Q86SQ0 1253 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 KLHL7Q8IXQ5 586 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 METTL13Q8N6R0 699 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 GLG1Q92896 1179 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 STAP2Q9UGK3 403 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 ARMCX3Q9UH62 379 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 USH1CQ9Y6N9 552 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 ECM2O94769 699 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 KRT15P19012 456 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 POLR2BP30876 1174 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 SMAP1Q8IYB5 467 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 IL17REQ8NFR9 667 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 PPP4R1Q8TF05 950 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 ARHGEF2Q92974 986 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 XPO4Q9C0E2 1151 aaKnown RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 C1orf112Q9NSG2 853 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 ABCA8O94911 1581 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 TESPA1A2RU30 521 aaPredicted RBP7.13□□□□□ -1.27
LSAMP-207ENST00000539563 CDC25BP30305 580 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 INPP5BP32019 993 aa7.13□□□□□ -1.27
LSAMP-207ENST00000539563 RAD51AP2Q09MP3 1159 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms