RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ADSSL1Q8N142 457 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 CCDC148Q8NFR7 591 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 FAM71BQ8TC56 605 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 ZNF507Q8TCN5 953 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 ACBD3Q9H3P7 528 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 SUGCTQ9HAC7 445 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 PODXL2Q9NZ53 605 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 SLAIN2Q9P270 581 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 FEZ2Q9UHY8 353 aaPredicted RBP10.88□□□□□ -0.67
CDH13-204ENST00000539548 CAPN11Q9UMQ6 739 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDH13-204ENST00000539548 A0A1B0GUL6 1792 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 RREB1Q92766 1687 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 TTC26A0AVF1 554 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 LGALS16A8MUM7 142 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 N4BP1O75113 896 aaKnown RBP10.87□□□□□ -0.67
CDH13-204ENST00000539548 EEF1GP26641 437 aaKnown RBP10.87□□□□□ -0.67
CDH13-204ENST00000539548 USP14P54578 494 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 INTS5Q6P9B9 1019 aaKnown RBP10.87□□□□□ -0.67
CDH13-204ENST00000539548 VIPAS39Q9H9C1 493 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 MED4Q9NPJ6 270 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 GUCA1BQ9UMX6 200 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 FAN1Q9Y2M0 1017 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 GDAQ9Y2T3 454 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 LUC7L2Q9Y383 392 aaKnown RBP10.87□□□□□ -0.67
CDH13-204ENST00000539548 NTSR2O95665 410 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 MCM3P25205 808 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 CALML3P27482 149 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 UBE4AQ14139 1066 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 KCNB1Q14721 858 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
CDH13-204ENST00000539548 PAPD7Q5XG87 772 aaKnown RBP10.87□□□□□ -0.67
CDH13-204ENST00000539548 NCAPH2Q6IBW4 605 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 TMED8Q6PL24 325 aaPredicted RBP10.87□□□□□ -0.67
CDH13-204ENST00000539548 TRERF1Q96PN7 1200 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 THAP9Q9H5L6 903 aa10.87□□□□□ -0.67
CDH13-204ENST00000539548 USP17L12C9JPN9 530 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 USP17L21D6R901 530 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 CAMTA2O94983 1202 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 MYL1P05976 194 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 IVLP07476 585 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 STAT6P42226 847 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 GYG1P46976 350 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 HSP90B2PQ58FF3 399 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 WDR59Q6PJI9 974 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 LEKR1Q6ZMV7 388 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 SH3GLB2Q9NR46 395 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 RGS17Q9UGC6 210 aaPredicted RBP10.86□□□□□ -0.67
CDH13-204ENST00000539548 COL1A1P02452 1464 aaPredicted RBP10.86□□□□□ -0.67
CDH13-204ENST00000539548 PDS5AQ29RF7 1337 aaKnown RBP10.86□□□□□ -0.67
CDH13-204ENST00000539548 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
CDH13-204ENST00000539548 ADAMTS3O15072 1205 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 DNM2P50570 870 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 HERVK_113P62684 666 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 KRT83P78385 493 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 BLIDQ8IZY5 108 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 ZNF384Q8TF68 577 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
CDH13-204ENST00000539548 MAPK8IP1Q9UQF2 711 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 SAR1BQ9Y6B6 198 aa10.86□□□□□ -0.67
CDH13-204ENST00000539548 BAZ2BQ9UIF8 2168 aaKnown RBP10.85□□□□□ -0.67
CDH13-204ENST00000539548 TARSL2A2RTX5 802 aaKnown RBP10.85□□□□□ -0.67
CDH13-204ENST00000539548 LRRIQ3A6PVS8 624 aaPredicted RBP10.85□□□□□ -0.67
CDH13-204ENST00000539548 VEGFAP15692 232 aaPredicted RBP10.85□□□□□ -0.67
CDH13-204ENST00000539548 GTF2E1P29083 439 aaPredicted RBP10.85□□□□□ -0.67
CDH13-204ENST00000539548 KIF5BP33176 963 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 AARSP49588 968 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDH13-204ENST00000539548 MEA1Q16626 185 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 EHBP1Q8NDI1 1231 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 CCDC102AQ96A19 550 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 NUP58Q9BVL2 599 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 DISC1Q9NRI5 854 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 BTG4Q9NY30 223 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 TRIM10Q9UDY6 481 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 LAMB1P07942 1786 aa10.85□□□□□ -0.67
CDH13-204ENST00000539548 TRIM49BA6NDI0 452 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 EXOC5O00471 708 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 KLRC4O43908 158 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 RHOBTB3O94955 611 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 SRGNP10124 158 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 STIM1Q13586 685 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 MAP9Q49MG5 647 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 NAALADL2Q58DX5 795 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 CAVIN4Q5BKX8 364 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 CCDC122Q5T0U0 273 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 GIMAP8Q8ND71 665 aaPredicted RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 FAM84BQ96KN1 310 aaPredicted RBP10.84□□□□□ -0.67
CDH13-204ENST00000539548 MMS19Q96T76 1030 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 CCSER1Q9C0I3 900 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 PCDHA4Q9UN74 947 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 MYO1CO00159 1063 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 PSMA7O14818 248 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 KRT86O43790 486 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 NMT2O60551 498 aa10.84□□□□□ -0.67
CDH13-204ENST00000539548 ATP1A1P05023 1023 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms