RNA–Protein interactions for RNA: ENST00000539477.5

MLH1-222, Transcript of mutL homolog 1, human

TSL 2 BASIC

Gene MLH1, Length 2,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MLH1-222	ENST00000539477	PPP1R9A	Q9ULJ8	1098 aa		10.87	□□□□□ -0.67
MLH1-222	ENST00000539477	RIPK3	Q9Y572	518 aa		10.87	□□□□□ -0.67
MLH1-222	ENST00000539477	hCG_1642624	A0A1W2PR95	340 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	VWA5A	O00534	786 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	DSG3	P32926	999 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	PSMC4	P43686	418 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	FGD1	P98174	961 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	ZNF543	Q08ER8	600 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.86	□□□□□ -0.67	2e-17	■■□□□ 11.6
MLH1-222	ENST00000539477	SART3	Q15020	963 aa	Known RBP	10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	TSGA10IP	Q3SY00	556 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	DHX32	Q7L7V1	743 aa	Known RBP	10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	ZNF654	Q8IZM8	581 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	GMCL1	Q96IK5	515 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	RAVER2	Q9HCJ3	691 aa	Known RBP	10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	VAT1L	Q9HCJ6	419 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	SLC45A1	Q9Y2W3	748 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	TRIM17	Q9Y577	477 aa		10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.86	□□□□□ -0.67
MLH1-222	ENST00000539477	FKTN	O75072	461 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	RPS6KB1	P23443	525 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	EXOSC10	Q01780	885 aa	Known RBP	10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	TROAP	Q12815	778 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	FAM110C	Q1W6H9	321 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	TTC14	Q96N46	770 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	CFHR5	Q9BXR6	569 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	ZCCHC17	Q9NP64	241 aa	Known RBP	10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	MAD2L2	Q9UI95	211 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	ZNF214	Q9UL59	606 aa	Predicted RBP	10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	PRR12	Q9ULL5	1215 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	GABRQ	Q9UN88	632 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	DDX49	Q9Y6V7	483 aa	Known RBP	10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	DHX16	O60231	1041 aa	Known RBP	10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	PLEKHA8P1	O95397	391 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	SNHG28	P0DPA3	235 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	LBX2	Q6XYB7	198 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	HOMER1	Q86YM7	354 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	AGBL1	Q96MI9	1066 aa		10.85	□□□□□ -0.67
MLH1-222	ENST00000539477	KLF18	A0A0U1RQI7	1052 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	FMNL1	O95466	1100 aa	Predicted RBP	10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	PRKCZ	Q05513	592 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	STK3	Q13188	491 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	TOB2	Q14106	344 aa	Predicted RBP	10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	KRT32	Q14532	448 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	USH1G	Q495M9	461 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	SNRNP48	Q6IEG0	339 aa	Known RBP	10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	APOA5	Q6Q788	366 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	RUFY3	Q7L099	469 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	OTOP1	Q7RTM1	612 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	REPS2	Q8NFH8	660 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	KIF2C	Q99661	725 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	SPATC1L	Q9H0A9	340 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	NCOA5	Q9HCD5	579 aa	Known RBP	10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	CCDC69	A6NI79	296 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	CYTH3	O43739	400 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	PARP1	P09874	1014 aa	Known RBP	10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	NCAPG2	Q86XI2	1143 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	PRPF38A	Q8NAV1	312 aa	Known RBP	10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	GPRC5A	Q8NFJ5	357 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	C22orf23	Q9BZE7	217 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	ZNF536	O15090	1300 aa		10.84	□□□□□ -0.67
MLH1-222	ENST00000539477	TNPO2	O14787	897 aa	Known RBP	10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	ERCC3	P19447	782 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	GCLC	P48506	637 aa	Predicted RBP	10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	SYDE2	Q5VT97	1194 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	DCAF4	Q8WV16	495 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	TMEM87B	Q96K49	555 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	BACH2	Q9BYV9	841 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	ZSWIM6	Q9HCJ5	1215 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	HOXC10	Q9NYD6	342 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	SLC12A7	Q9Y666	1083 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	GOLGA8B	A8MQT2	603 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	KLRF2	D3W0D1	207 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	CDC27	P30260	824 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	CCT2	P78371	535 aa	Known RBP	10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	CATIP	Q7Z7H3	387 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	ADGRF4	Q8IZF3	695 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	ANKS1A	Q92625	1134 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	SLC38A10	Q9HBR0	1119 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	FEM1B	Q9UK73	627 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	RABGAP1	Q9Y3P9	1069 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	CYP46A1	Q9Y6A2	500 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	CDH23	Q9H251	3354 aa		10.83	□□□□□ -0.68
MLH1-222	ENST00000539477	LARGE1	O95461	756 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	PGK2	P07205	417 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	ELN	P15502	786 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	GPR142	Q7Z601	462 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	CCAR1	Q8IX12	1150 aa	Known RBP	10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	PURB	Q96QR8	312 aa	Known RBP	10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	MORF4L1	Q9UBU8	362 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	ADAMTS5	Q9UNA0	930 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	PTCH2	Q9Y6C5	1203 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	PPP1R11	O60927	126 aa	Predicted RBP	10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	ALAS1	P13196	640 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	LIFR	P42702	1097 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	NEK4	P51957	841 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	GRM4	Q14833	912 aa		10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	CDC37	Q16543	378 aa	Predicted RBP	10.82	□□□□□ -0.68
MLH1-222	ENST00000539477	MUM1L1	Q5H9M0	696 aa		10.82	□□□□□ -0.68

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