RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SNRNP48Q6IEG0 339 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 CPXCR1Q8N123 301 aa22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 TEX13BQ9BXU2 312 aa22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 RBM27Q9P2N5 1060 aaKnown RBP22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 FEM1BQ9UK73 627 aa22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 CTDP1Q9Y5B0 961 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ZBED4O75132 1171 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 HSPD1P10809 573 aaKnown RBP22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 BMP3P12645 472 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 COPB2P35606 906 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ANO1Q5XXA6 986 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 RAVER2Q9HCJ3 691 aaKnown RBP22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 IL17RBQ9NRM6 502 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 TOMM22Q9NS69 142 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 STX8Q9UNK0 236 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 RIPK3Q9Y572 518 aa22.6■■□□□ 1.21
TNFRSF1A-212ENST00000539372 CCDC171Q6TFL3 1326 aa22.59■■□□□ 1.21
TNFRSF1A-212ENST00000539372 MSCO60682 206 aa22.59■■□□□ 1.21
TNFRSF1A-212ENST00000539372 COL6A1P12109 1028 aa22.59■■□□□ 1.21
TNFRSF1A-212ENST00000539372 SDSP20132 328 aa22.59■■□□□ 1.21
TNFRSF1A-212ENST00000539372 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1A-212ENST00000539372 TICAM2Q86XR7 235 aa22.59■■□□□ 1.21
TNFRSF1A-212ENST00000539372 OSBPL3Q9H4L5 887 aa22.59■■□□□ 1.21
TNFRSF1A-212ENST00000539372 TMEM232C9JQI7 657 aa22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 FXR1P51114 621 aaKnown RBP eCLIP22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 HAND2P61296 217 aa22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ZNF792Q3KQV3 632 aa22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 RRP12Q5JTH9 1297 aaKnown RBP22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 SLC38A10Q9HBR0 1119 aa22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ZMYND8Q9ULU4 1186 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 MTMR7Q9Y216 660 aa22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 FRMPD3Q5JV73 1810 aa22.58■■□□□ 1.21
TNFRSF1A-212ENST00000539372 ORC4O43929 436 aa22.57■■□□□ 1.2
TNFRSF1A-212ENST00000539372 MCCP23508 829 aa22.57■■□□□ 1.2
TNFRSF1A-212ENST00000539372 SLC1A4P43007 532 aa22.57■■□□□ 1.2
TNFRSF1A-212ENST00000539372 PPP4R3BQ5MIZ7 849 aa22.57■■□□□ 1.2
TNFRSF1A-212ENST00000539372 RASGRP2Q7LDG7 609 aa22.57■■□□□ 1.2
TNFRSF1A-212ENST00000539372 ZNFX1Q9P2E3 1918 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1A-212ENST00000539372 ATP2A1O14983 1001 aa22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 SEPT4O43236 478 aa22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 FGRP09769 529 aa22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 SYN1P17600 705 aa22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 IKQ13123 557 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 LRRC26Q2I0M4 334 aa22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 GMCL1Q96IK5 515 aa22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 SENP6Q9GZR1 1112 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF1A-212ENST00000539372 MYCNP04198 464 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 STAT2P52630 851 aa22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 GJC2Q5T442 439 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 CWC27Q6UX04 472 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 KCTD1Q719H9 257 aa22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 DDX11Q96FC9 970 aa22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 TINF2Q9BSI4 451 aa22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 PRO3102Q9H379 93 aa22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 PCDH10Q9P2E7 1040 aa22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 DIS3Q9Y2L1 958 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 ZMYM6O95789 1325 aa22.55■■□□□ 1.2
TNFRSF1A-212ENST00000539372 DNM1LO00429 736 aa22.54■■□□□ 1.2
TNFRSF1A-212ENST00000539372 TAL1P17542 331 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF1A-212ENST00000539372 STAG1Q8WVM7 1258 aa22.54■■□□□ 1.2
TNFRSF1A-212ENST00000539372 HOMER2Q9NSB8 354 aa22.54■■□□□ 1.2
TNFRSF1A-212ENST00000539372 DIAPH3Q9NSV4 1193 aa22.54■■□□□ 1.2
TNFRSF1A-212ENST00000539372 TRIOBPQ9H2D6 2365 aa22.53■■□□□ 1.2
TNFRSF1A-212ENST00000539372 MFAP1P55081 439 aaKnown RBP22.53■■□□□ 1.2
TNFRSF1A-212ENST00000539372 FAM160B2Q86V87 743 aa22.53■■□□□ 1.2
TNFRSF1A-212ENST00000539372 TBC1D10CQ8IV04 446 aa22.53■■□□□ 1.2
TNFRSF1A-212ENST00000539372 CHURC1Q8WUH1 139 aa22.53■■□□□ 1.2
TNFRSF1A-212ENST00000539372 NOVP48745 357 aa22.52■■□□□ 1.2
TNFRSF1A-212ENST00000539372 ATN1P54259 1190 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF1A-212ENST00000539372 OAZ1P54368 228 aa22.52■■□□□ 1.2
TNFRSF1A-212ENST00000539372 SNAP25P60880 206 aa22.52■■□□□ 1.2
TNFRSF1A-212ENST00000539372 CCDC96Q2M329 555 aa22.52■■□□□ 1.2
TNFRSF1A-212ENST00000539372 RCSD1Q6JBY9 416 aa22.52■■□□□ 1.2
TNFRSF1A-212ENST00000539372 ARRDC4Q8NCT1 418 aa22.52■■□□□ 1.2
TNFRSF1A-212ENST00000539372 PLXNA1Q9UIW2 1896 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 DNAJC25-GNG10A0A024R161 153 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 PDE4AP27815 886 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 AKNAD1Q5T1N1 836 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 CCDC174Q6PII3 467 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 MFSD6Q6ZSS7 791 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ANKRD35Q8N283 1001 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 CHST13Q8NET6 341 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 AGBL1Q96MI9 1066 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 NRBP1Q9UHY1 535 aa22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 RANBP2P49792 3224 aaKnown RBP22.51■■□□□ 1.19
TNFRSF1A-212ENST00000539372 KBTBD13C9JR72 458 aa22.5■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ZNF865P0CJ78 1059 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF1A-212ENST00000539372 FDX1P10109 184 aa22.5■■□□□ 1.19
TNFRSF1A-212ENST00000539372 TMEM47Q9BQJ4 181 aa22.5■■□□□ 1.19
TNFRSF1A-212ENST00000539372 FBXO40Q9UH90 709 aa22.5■■□□□ 1.19
TNFRSF1A-212ENST00000539372 CNPY2Q9Y2B0 182 aa22.5■■□□□ 1.19
TNFRSF1A-212ENST00000539372 ZNF536O15090 1300 aa22.5■■□□□ 1.19
TNFRSF1A-212ENST00000539372 HIP1O00291 1037 aa22.49■■□□□ 1.19
TNFRSF1A-212ENST00000539372 PLA2G6O60733 806 aa22.49■■□□□ 1.19
TNFRSF1A-212ENST00000539372 TOP1P11387 765 aaKnown RBP22.49■■□□□ 1.19
TNFRSF1A-212ENST00000539372 LRRC41Q15345 812 aa22.49■■□□□ 1.19
TNFRSF1A-212ENST00000539372 LENG1Q96BZ8 264 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1A-212ENST00000539372 TCP11L1Q9NUJ3 509 aa22.49■■□□□ 1.19
TNFRSF1A-212ENST00000539372 PRR12Q9ULL5 1215 aa22.49■■□□□ 1.19
TNFRSF1A-212ENST00000539372 NEDD4P46934 1319 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms