RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 NLRX1Q86UT6 975 aa2.78□□□□□ -1.96
NPIPB4-209ENST00000538859 MZB1Q8WU39 189 aa2.78□□□□□ -1.96
NPIPB4-209ENST00000538859 USP40Q9NVE5 1235 aa2.78□□□□□ -1.96
NPIPB4-209ENST00000538859 FAM8A1Q9UBU6 413 aa2.78□□□□□ -1.96
NPIPB4-209ENST00000538859 ST6GALNAC2Q9UJ37 374 aa2.78□□□□□ -1.96
NPIPB4-209ENST00000538859 ZNF281Q9Y2X9 895 aa2.78□□□□□ -1.96
NPIPB4-209ENST00000538859 SHROOM4Q9ULL8 1493 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 A0A1B0GTL3 188 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 SOWAHDA6NJG2 315 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 NOTOA8MTQ0 251 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 ABLIM1O14639 778 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 EFEMP2O95967 443 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 USP17L7P0C7H9 530 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 MAPK1P28482 360 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 MAPK8P45983 427 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 SLC14A2Q15849 920 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 DPY19L2P1Q6NXN4 242 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 ADGRG2Q8IZP9 1017 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 ACSF2Q96CM8 615 aaPredicted RBP2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 SPATA25Q9BR10 227 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 LNPKQ9C0E8 428 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 C12orf49Q9H741 205 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 CRTAC1Q9NQ79 661 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 BIN2Q9UBW5 565 aaPredicted RBP2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 ADAM30Q9UKF2 790 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 SPG7Q9UQ90 795 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 PCDHB5Q9Y5E4 795 aa2.77□□□□□ -1.97
NPIPB4-209ENST00000538859 RBM47A0AV96 593 aaKnown RBP2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 UPK3BL1B0FP48 263 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 UPK3BL2E5RIL1 263 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 NOBOXO60393 691 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 PNLIPP16233 465 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 RPL10P27635 214 aaKnown RBP2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 RBM25P49756 843 aaKnown RBP2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 YARSP54577 528 aaKnown RBP2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 YBX1P67809 324 aaKnown RBP2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 SEPT6Q14141 434 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 CLEC16AQ2KHT3 1053 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 TSNAXIP1Q2TAA8 658 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 VWA3BQ502W6 1294 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 CYB5D2Q8WUJ1 264 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 RNF141Q8WVD5 230 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 SETDB2Q96T68 719 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 G6PC3Q9BUM1 346 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 C1orf115Q9H7X2 142 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 ZMYM5Q9UJ78 669 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 WWC3Q9ULE0 1092 aa2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 TTF2Q9UNY4 1162 aaKnown RBP2.76□□□□□ -1.97
NPIPB4-209ENST00000538859 NRDCO43847 1150 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 CDK11BP21127 795 aaKnown RBP2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 SDHBP21912 280 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 KIR2DL1P43626 348 aaPredicted RBP2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 KIR2DL2P43627 348 aaPredicted RBP2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 OLFML2BQ68BL8 750 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 RNF111Q6ZNA4 994 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 AGMOQ6ZNB7 445 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 USHBP1Q8N6Y0 703 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 FAM13CQ8NE31 585 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 ENOX1Q8TC92 643 aaKnown RBP2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 JARID2Q92833 1246 aaPredicted RBP2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 FRMD6Q96NE9 622 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 ASCC2Q9H1I8 757 aaPredicted RBP2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 MIR1-1HGQ9H1L0 117 aa2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 CDK11AQ9UQ88 783 aaPredicted RBP2.75□□□□□ -1.97
NPIPB4-209ENST00000538859 SHISA3A0PJX4 238 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 USP2O75604 605 aaPredicted RBP2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 MPOP05164 745 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 PLCG1P19174 1290 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 TNNI2P48788 182 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 ATP2B2Q01814 1243 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 RPL6Q02878 288 aaKnown RBP2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 FMR1Q06787 632 aaKnown RBP eCLIP2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 PDE4CQ08493 712 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 CCDC85BQ15834 202 aaPredicted RBP2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 TBC1D10BQ4KMP7 808 aaPredicted RBP2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 DIEXFQ68CQ4 756 aaKnown RBP2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 LIPIQ6XZB0 460 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 CEP128Q6ZU80 1094 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 WAPLQ7Z5K2 1190 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 LDHDQ86WU2 507 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 ZSCAN29Q8IWY8 852 aaPredicted RBP2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 CHST13Q8NET6 341 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 MAP6Q96JE9 813 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 KREMEN1Q96MU8 473 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 KLHL14Q9P2G3 628 aa2.74□□□□□ -1.97
NPIPB4-209ENST00000538859 TTBK1Q5TCY1 1321 aaPredicted RBP2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 SSU72P8A0A1W2PR75 194 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 EIF4BP23588 611 aaKnown RBP2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 LIG3P49916 1009 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 RTP1P59025 263 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 ERVFRD-1P60508 538 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 DPTQ07507 201 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 TMEM62Q0P6H9 643 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 MAP3K11Q16584 847 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 TMEM201Q5SNT2 666 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 SLFN12Q8IYM2 578 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 SYTL5Q8TDW5 730 aaPredicted RBP2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 KISS1RQ969F8 398 aaPredicted RBP2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 HHIPL1Q96JK4 782 aa2.73□□□□□ -1.97
NPIPB4-209ENST00000538859 CRAMP1Q96RY5 1269 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms