RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PATL2C9JE40 543 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 PARP1P09874 1014 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 FNTAP49354 379 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 EPHB4P54760 987 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 DDR1Q08345 913 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 EMBQ6PCB8 327 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 MFSD6Q6ZSS7 791 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 IFNL3Q8IZI9 196 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 FANCBQ8NB91 859 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 EPB41L4AQ9HCS5 686 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 PRDM11Q9NQV5 511 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 MEGF6O75095 1541 aa20.8■□□□□ 0.92
SFSWAP-207ENST00000538548 RCCD1A6NED2 376 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 KRT2P35908 639 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 CABP4P57796 275 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 IRF2BP1Q8IU81 584 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 CCDC170Q8IYT3 715 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 TMTC2Q8N394 836 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 ZNF507Q8TCN5 953 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 RUFY1Q96T51 708 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 TACO1Q9BSH4 297 aaKnown RBP20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 RNF26Q9BY78 433 aaPredicted RBP20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 TACC3Q9Y6A5 838 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 RIC1Q4ADV7 1423 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 TCRBV5S4A2TA0A5A2 114 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 ERICH2A1L162 156 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 MEFVO15553 781 aaPredicted RBP20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 PDXDC2PQ6P474 469 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 CREG2Q8IUH2 290 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 OTUD6BQ8N6M0 293 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 MTA3Q9BTC8 594 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 DONSONQ9NYP3 566 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 CEP83Q9Y592 693 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 DCCP43146 1447 aa20.79■□□□□ 0.92
SFSWAP-207ENST00000538548 H0YHG0 523 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 ZEB2O60315 1214 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 EEF1GP26641 437 aaKnown RBP20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 TTMPQ5BVD1 217 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 EARS2Q5JPH6 523 aaKnown RBP20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 TTC19Q6DKK2 380 aaPredicted RBP20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 DMGDHQ9UI17 866 aaKnown RBP20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 SNX12Q9UMY4 172 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 TIAM2Q8IVF5 1701 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 MYH6P13533 1939 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 PDS5AQ29RF7 1337 aaKnown RBP20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 MYH13Q9UKX3 1938 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 CYP27B1O15528 508 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 HDAC7Q8WUI4 952 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 LRRC1Q9BTT6 524 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 ZNHIT6Q9NWK9 470 aaKnown RBP20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 ALS2Q96Q42 1657 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 DISP2A7MBM2 1401 aa20.78■□□□□ 0.92
SFSWAP-207ENST00000538548 HSF2BPO75031 334 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 METTL24Q5JXM2 366 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 YTHDF3Q7Z739 585 aaKnown RBP20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 SECISBP2LQ93073 1101 aaKnown RBP20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 ARL8AQ96BM9 186 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 SHISA4Q96DD7 197 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 MTRQ99707 1265 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 ZKSCAN3Q9BRR0 538 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 PHF20Q9BVI0 1012 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 TSGA10Q9BZW7 698 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 PDCLQ13371 301 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 ZNF654Q8IZM8 581 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 NUP133Q8WUM0 1156 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 CAVIN3Q969G5 261 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 PAGR1Q9BTK6 254 aa20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 NHEJ1Q9H9Q4 299 aaPredicted RBP20.77■□□□□ 0.92
SFSWAP-207ENST00000538548 KIF1CO43896 1103 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 PRCPP42785 496 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 ATP2C1P98194 919 aaPredicted RBP20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 KIF5AQ12840 1032 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 EZH2Q15910 746 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 MICALCLQ6ZW33 695 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 TRIM58Q8NG06 486 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 CCDC85AQ96PX6 553 aaPredicted RBP20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 MACROD2A1Z1Q3 448 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 RPN1P04843 607 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 PRLRP16471 622 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 RRP12Q5JTH9 1297 aaKnown RBP20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 SPATA4Q8NEY3 305 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 STAG1Q8WVM7 1258 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 HINFPQ9BQA5 517 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 DUSP10Q9Y6W6 482 aa20.76■□□□□ 0.91
SFSWAP-207ENST00000538548 MYO1FO00160 1098 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 PES1O00541 588 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 WNT7AO00755 349 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 GPTP24298 496 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 TNFRSF8P28908 595 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 DNM2P50570 870 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 VAV2P52735 878 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 ZNF174Q15697 407 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 TSEN2Q8NCE0 465 aaKnown RBP20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 ISCA1Q9BUE6 129 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 TTYH3Q9C0H2 523 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 STIM2Q9P246 746 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 GDAQ9Y2T3 454 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 RIPOR2Q9Y4F9 1068 aa20.75■□□□□ 0.91
SFSWAP-207ENST00000538548 PPP2R5BQ15173 497 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms