RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LRRN4CLQ8ND94 238 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 ZNF287Q9HBT7 754 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 FANCGO15287 622 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 TXLNAP40222 546 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 STAT6P42226 847 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 SEPT12Q8IYM1 358 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 CPLX3Q8WVH0 158 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 PYM1Q9BRP8 204 aaKnown RBP28.18■■■□□ 2.1
RAB40C-204ENST00000538492 CGNQ9P2M7 1197 aaKnown RBP28.18■■■□□ 2.1
RAB40C-204ENST00000538492 ADD3Q9UEY8 706 aaKnown RBP28.18■■■□□ 2.1
RAB40C-204ENST00000538492 SPATA31A6Q5VVP1 1343 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 SNED1Q8TER0 1413 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 DTHD1Q6ZMT9 781 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 C16orf86Q6ZW13 317 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 MAPK8IP1Q9UQF2 711 aa28.18■■■□□ 2.1
RAB40C-204ENST00000538492 TUBB4AP04350 444 aa28.17■■■□□ 2.1
RAB40C-204ENST00000538492 USP17L2Q6R6M4 530 aa28.17■■■□□ 2.1
RAB40C-204ENST00000538492 RASSF8Q8NHQ8 419 aa28.17■■■□□ 2.1
RAB40C-204ENST00000538492 DDX60LQ5H9U9 1706 aaKnown RBP28.17■■■□□ 2.1
RAB40C-204ENST00000538492 CCDC93Q567U6 631 aa28.17■■■□□ 2.1
RAB40C-204ENST00000538492 IGSF22Q8N9C0 903 aa28.17■■■□□ 2.1
RAB40C-204ENST00000538492 TBC1D16Q8TBP0 767 aa28.17■■■□□ 2.1
RAB40C-204ENST00000538492 UBR3Q6ZT12 1888 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 C6orf229H3BNL8 230 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 PLIN2Q99541 437 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 DESI2Q9BSY9 194 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 RPN1P04843 607 aaKnown RBP28.16■■■□□ 2.1
RAB40C-204ENST00000538492 CCT6AP40227 531 aaKnown RBP28.16■■■□□ 2.1
RAB40C-204ENST00000538492 RHBDL3P58872 404 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 RBL2Q08999 1139 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 DISC1Q9NRI5 854 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 PHLPP2Q6ZVD8 1323 aa28.16■■■□□ 2.1
RAB40C-204ENST00000538492 AKR1B15C9JRZ8 316 aaPredicted RBP28.15■■■□□ 2.1
RAB40C-204ENST00000538492 DAGLBQ8NCG7 672 aa28.15■■■□□ 2.1
RAB40C-204ENST00000538492 CEP95Q96GE4 821 aa28.15■■■□□ 2.1
RAB40C-204ENST00000538492 VAT1LQ9HCJ6 419 aa28.15■■■□□ 2.1
RAB40C-204ENST00000538492 MTF1Q14872 753 aa28.15■■■□□ 2.1
RAB40C-204ENST00000538492 CREBRFQ8IUR6 639 aa28.15■■■□□ 2.1
RAB40C-204ENST00000538492 CTAGE1Q96RT6 745 aa28.15■■■□□ 2.1
RAB40C-204ENST00000538492 GDAQ9Y2T3 454 aa28.15■■■□□ 2.1
RAB40C-204ENST00000538492 PARP1P09874 1014 aaKnown RBP28.14■■■□□ 2.1
RAB40C-204ENST00000538492 NAPAP54920 295 aa28.14■■■□□ 2.1
RAB40C-204ENST00000538492 NEDD1Q8NHV4 660 aa28.14■■■□□ 2.1
RAB40C-204ENST00000538492 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.14■■■□□ 2.15e-6■■■■□ 23
RAB40C-204ENST00000538492 MYH1P12882 1939 aa28.14■■■□□ 2.1
RAB40C-204ENST00000538492 AFF2P51816 1311 aa28.14■■■□□ 2.1
RAB40C-204ENST00000538492 FILIP1LQ4L180 1135 aa28.14■■■□□ 2.1
RAB40C-204ENST00000538492 PPFIBP1Q86W92 1011 aa28.14■■■□□ 2.1
RAB40C-204ENST00000538492 CERS3Q8IU89 383 aa28.14■■■□□ 2.1
RAB40C-204ENST00000538492 PAK1Q13153 545 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 ZNF658Q5TYW1 1059 aaPredicted RBP28.13■■■□□ 2.09
RAB40C-204ENST00000538492 GALNT17Q6IS24 598 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 NELFBQ8WX92 580 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 BBOX1O75936 387 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 PLCG2P16885 1265 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 PBX1P40424 430 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 DDR1Q08345 913 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 ERCC6LQ2NKX8 1250 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 NAALADL2Q58DX5 795 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 LZTS2Q9BRK4 669 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 RWDD2AQ9UIY3 292 aa28.13■■■□□ 2.09
RAB40C-204ENST00000538492 SOWAHDA6NJG2 315 aa28.12■■■□□ 2.09
RAB40C-204ENST00000538492 URI1O94763 535 aaPredicted RBP28.12■■■□□ 2.09
RAB40C-204ENST00000538492 SPZ1Q9BXG8 430 aa28.12■■■□□ 2.09
RAB40C-204ENST00000538492 UBA7P41226 1012 aa28.12■■■□□ 2.09
RAB40C-204ENST00000538492 KRT31Q15323 416 aa28.12■■■□□ 2.09
RAB40C-204ENST00000538492 KMT5BQ4FZB7 885 aa28.12■■■□□ 2.09
RAB40C-204ENST00000538492 RMND1Q9NWS8 449 aa28.12■■■□□ 2.09
RAB40C-204ENST00000538492 RIMBP2O15034 1052 aa28.11■■■□□ 2.09
RAB40C-204ENST00000538492 PRCPP42785 496 aa28.11■■■□□ 2.09
RAB40C-204ENST00000538492 GTF2IP78347 998 aa28.11■■■□□ 2.09
RAB40C-204ENST00000538492 PICALMQ13492 652 aa28.11■■■□□ 2.09
RAB40C-204ENST00000538492 ZMYND12Q9H0C1 365 aa28.11■■■□□ 2.09
RAB40C-204ENST00000538492 VPS16Q9H269 839 aa28.11■■■□□ 2.09
RAB40C-204ENST00000538492 PODXL2Q9NZ53 605 aa28.11■■■□□ 2.09
RAB40C-204ENST00000538492 SMCO2A6NFE2 343 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 LETM2Q2VYF4 491 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 PANX2Q96RD6 677 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 UBA5Q9GZZ9 404 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 F8W031 263 aaPredicted RBP28.1■■■□□ 2.09
RAB40C-204ENST00000538492 CASP14P31944 242 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 GNG11P61952 73 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 FBXO38Q6PIJ6 1188 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 RRP36Q96EU6 259 aaKnown RBP28.1■■■□□ 2.09
RAB40C-204ENST00000538492 WDR24Q96S15 920 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 PRDM10Q9NQV6 1147 aa28.1■■■□□ 2.09
RAB40C-204ENST00000538492 N4BP3O15049 544 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 CCNT1O60563 726 aaKnown RBP28.09■■■□□ 2.09
RAB40C-204ENST00000538492 SLF2Q8IX21 1173 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 ZNF397Q8NF99 534 aaPredicted RBP28.09■■■□□ 2.09
RAB40C-204ENST00000538492 TBC1D22AQ8WUA7 517 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 FAM163AQ96GL9 167 aaPredicted RBP28.09■■■□□ 2.09
RAB40C-204ENST00000538492 PIGSQ96S52 555 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 GAKO14976 1311 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 USP17L5A8MUK1 530 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 TAB2Q9NYJ8 693 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 SEC63Q9UGP8 760 aaKnown RBP28.09■■■□□ 2.09
RAB40C-204ENST00000538492 DAGLAQ9Y4D2 1042 aa28.09■■■□□ 2.09
RAB40C-204ENST00000538492 ONECUT3O60422 494 aaPredicted RBP28.08■■■□□ 2.09
RAB40C-204ENST00000538492 PARP3Q9Y6F1 533 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms