RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
DDB1-211ENST00000538280 hCG_1642624A0A1W2PR95 340 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 KIF2AO00139 706 aaPredicted RBP10.53□□□□□ -0.72
DDB1-211ENST00000538280 TRAF5O00463 557 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 BAG3O95817 575 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 SLFN14P0C7P3 912 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 CALML3P27482 149 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 GNAQP50148 359 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 SCNN1DP51172 638 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 PLCD1P51178 756 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 UBASH3AP57075 661 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 GPSM2P81274 684 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 RBM10P98175 930 aaKnown RBP10.53□□□□□ -0.72
DDB1-211ENST00000538280 E2F4Q16254 413 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 NOM1Q5C9Z4 860 aaKnown RBP10.53□□□□□ -0.72
DDB1-211ENST00000538280 E4F1Q66K89 784 aaPredicted RBP10.53□□□□□ -0.72
DDB1-211ENST00000538280 CCDC112Q8NEF3 446 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 CD209Q9NNX6 404 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 FANCLQ9NW38 375 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 MCM9Q9NXL9 1143 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 GAKO14976 1311 aa10.53□□□□□ -0.72
DDB1-211ENST00000538280 MYH1P12882 1939 aa10.52□□□□□ -0.72
DDB1-211ENST00000538280 CASP8AP2Q9UKL3 1982 aa10.52□□□□□ -0.72
DDB1-211ENST00000538280 TNRC18O15417 2968 aaPredicted RBP10.52□□□□□ -0.73
DDB1-211ENST00000538280 GPR75-ASB3A0A0A6YYF3 556 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 SLC34A2O95436 690 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 TUBB4AP04350 444 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 SFPQP23246 707 aaKnown RBP eCLIP10.52□□□□□ -0.73
DDB1-211ENST00000538280 EPS15P42566 896 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 USP5P45974 858 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 TFAP4Q01664 338 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 DPYDQ12882 1025 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 DEFB115Q30KQ5 88 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 CEP135Q66GS9 1140 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 ARL6IP4Q66PJ3 421 aaKnown RBP10.52□□□□□ -0.73
DDB1-211ENST00000538280 CYP4F22Q6NT55 531 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 FCHSD1Q86WN1 690 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 C4orf32Q8N8J7 132 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 PNMA1Q8ND90 353 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 SYMPKQ92797 1274 aaKnown RBP10.52□□□□□ -0.73
DDB1-211ENST00000538280 PAGE5Q96GU1 130 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 CCDC34Q96HJ3 373 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 PYM1Q9BRP8 204 aaKnown RBP10.52□□□□□ -0.73
DDB1-211ENST00000538280 KAT14Q9H8E8 782 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 ANKIB1Q9P2G1 1089 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 MAD2L2Q9UI95 211 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 ABT1Q9ULW3 272 aaKnown RBP10.52□□□□□ -0.73
DDB1-211ENST00000538280 GJA3Q9Y6H8 435 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 FAM205AQ6ZU69 1335 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 PLIN4Q96Q06 1357 aa10.52□□□□□ -0.73
DDB1-211ENST00000538280 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
DDB1-211ENST00000538280 ADAMTS3O15072 1205 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 SERPINC1P01008 464 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 RASA1P20936 1047 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 NLRP5P59047 1200 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 GRM1Q13255 1194 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 PTGDRQ13258 359 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 CUL4BQ13620 913 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 PTPN14Q15678 1187 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 ZNF174Q15697 407 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 GALNT17Q6IS24 598 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 C16orf86Q6ZW13 317 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 APTXQ7Z2E3 356 aaKnown RBP10.51□□□□□ -0.73
DDB1-211ENST00000538280 TMEM139Q8IV31 216 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 GRAMD1CQ8IYS0 662 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 BLIDQ8IZY5 108 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 RPGRQ92834 1020 aaKnown RBP10.51□□□□□ -0.73
DDB1-211ENST00000538280 DHX58Q96C10 678 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 DYNLL2Q96FJ2 89 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 RBM17Q96I25 401 aaKnown RBP10.51□□□□□ -0.73
DDB1-211ENST00000538280 EPSTI1Q96J88 318 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 PPP1R13BQ96KQ4 1090 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 GSDMAQ96QA5 445 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 CRAMP1Q96RY5 1269 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 PCDHA4Q9UN74 947 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 JAG2Q9Y219 1238 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 NFE2L3Q9Y4A8 694 aa10.51□□□□□ -0.73
DDB1-211ENST00000538280 GREB1LQ9C091 1923 aaPredicted RBP10.5□□□□□ -0.73
DDB1-211ENST00000538280 ZNF646O15015 1829 aaPredicted RBP10.5□□□□□ -0.73
DDB1-211ENST00000538280 TMEM232C9JQI7 657 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 NRDCO43847 1150 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 AOC2O75106 756 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 BBOX1O75936 387 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 PLCG2P16885 1265 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 ATP2B1P20020 1258 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 SMARCA1P28370 1054 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 BTDP43251 543 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 RHBDL3P58872 404 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 DIXDC1Q155Q3 683 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 IL17AQ16552 155 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 CFAP100Q494V2 611 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 CDKAL1Q5VV42 579 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 CST9Q5W186 159 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 PDXDC2PQ6P474 469 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 TMC4Q7Z404 712 aa10.5□□□□□ -0.73
DDB1-211ENST00000538280 AMOTL1Q8IY63 956 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 237.9 ms