RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 WTAPQ15007 396 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 DHX32Q7L7V1 743 aaKnown RBP15.35■□□□□ 0.05
CHFR-216ENST00000538235 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 ZNF654Q8IZM8 581 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 KIFC2Q96AC6 838 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
CHFR-216ENST00000538235 UBA5Q9GZZ9 404 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 PRR12Q9ULL5 1215 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 GABRQQ9UN88 632 aa15.35■□□□□ 0.05
CHFR-216ENST00000538235 CYTH3O43739 400 aa15.34■□□□□ 0.05
CHFR-216ENST00000538235 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
CHFR-216ENST00000538235 GCLCP48506 637 aaPredicted RBP15.34■□□□□ 0.05
CHFR-216ENST00000538235 LARP6Q9BRS8 491 aaKnown RBP15.34■□□□□ 0.05
CHFR-216ENST00000538235 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
CHFR-216ENST00000538235 ZSWIM6Q9HCJ5 1215 aa15.34■□□□□ 0.05
CHFR-216ENST00000538235 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
CHFR-216ENST00000538235 WDR19Q8NEZ3 1342 aa15.34■□□□□ 0.05
CHFR-216ENST00000538235 PALM3A6NDB9 673 aaPredicted RBP15.33■□□□□ 0.04
CHFR-216ENST00000538235 PLEKHA8P1O95397 391 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.04
CHFR-216ENST00000538235 STAT2P52630 851 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 SGMS1Q86VZ5 419 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 TMEM87BQ96K49 555 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 SPATC1LQ9H0A9 340 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 SLC38A10Q9HBR0 1119 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 BRCA2P51587 3418 aa15.33■□□□□ 0.04
CHFR-216ENST00000538235 PLA2G6O60733 806 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 PPP1R11O60927 126 aaPredicted RBP15.32■□□□□ 0.04
CHFR-216ENST00000538235 DTNBO60941 627 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 LIFRP42702 1097 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 PSMC4P43686 418 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 PRKCZQ05513 592 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 APOBRQ0VD83 1088 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 KRT32Q14532 448 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 PPP4R3BQ5MIZ7 849 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 SYDE2Q5VT97 1194 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 APOA5Q6Q788 366 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 Q6ZUG5 572 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 CMTR1Q8N1G2 835 aaKnown RBP15.32■□□□□ 0.04
CHFR-216ENST00000538235 AGBL1Q96MI9 1066 aa15.32■□□□□ 0.04
CHFR-216ENST00000538235 RANBP17Q9H2T7 1088 aaKnown RBP15.32■□□□□ 0.04
CHFR-216ENST00000538235 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
CHFR-216ENST00000538235 FAM217BQ9NTX9 383 aaPredicted RBP15.32■□□□□ 0.04
CHFR-216ENST00000538235 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
CHFR-216ENST00000538235 CCDC178Q5BJE1 867 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 GPR142Q7Z601 462 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
CHFR-216ENST00000538235 GPRC5AQ8NFJ5 357 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 BRF1Q92994 677 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 MTA3Q9BTC8 594 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 TM6SF1Q9BZW5 370 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 GJD2Q9UKL4 321 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 TRIM17Q9Y577 477 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 PTCH2Q9Y6C5 1203 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 NID2Q14112 1375 aa15.31■□□□□ 0.04
CHFR-216ENST00000538235 LARGE1O95461 756 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 ERCC3P19447 782 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 CDC27P30260 824 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 FUT2Q10981 343 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 ASPRV1Q53RT3 343 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 CCDC174Q6PII3 467 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 CTU1Q7Z7A3 348 aaKnown RBP15.3■□□□□ 0.04
CHFR-216ENST00000538235 FAM160B2Q86V87 743 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 CPXCR1Q8N123 301 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 USP6NLQ92738 828 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 MTMR8Q96EF0 704 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 BACH2Q9BYV9 841 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 MCOLN1Q9GZU1 580 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 JMJD4Q9H9V9 463 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 HOXC10Q9NYD6 342 aa15.3■□□□□ 0.04
CHFR-216ENST00000538235 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 DDAH1O94760 285 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 PARP1P09874 1014 aaKnown RBP15.29■□□□□ 0.04
CHFR-216ENST00000538235 ST3GAL1Q11201 340 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 PLS1Q14651 629 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 MUM1L1Q5H9M0 696 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 MORN1Q5T089 497 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 SNRNP48Q6IEG0 339 aaKnown RBP15.29■□□□□ 0.04
CHFR-216ENST00000538235 RIOX2Q8IUF8 465 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 ADGRF4Q8IZF3 695 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 SRBD1Q8N5C6 995 aaKnown RBP15.29■□□□□ 0.04
CHFR-216ENST00000538235 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
CHFR-216ENST00000538235 FGD4Q96M96 766 aa15.29■□□□□ 0.04
CHFR-216ENST00000538235 ASTN1O14525 1302 aa15.28■□□□□ 0.04
CHFR-216ENST00000538235 CNTNAP5Q8WYK1 1306 aa15.28■□□□□ 0.04
CHFR-216ENST00000538235 ERICH2A1L162 156 aa15.28■□□□□ 0.04
CHFR-216ENST00000538235 KLRF2D3W0D1 207 aa15.28■□□□□ 0.04
CHFR-216ENST00000538235 TNPO2O14787 897 aaKnown RBP15.28■□□□□ 0.04
CHFR-216ENST00000538235 OPLAHO14841 1288 aa15.28■□□□□ 0.04
CHFR-216ENST00000538235 ATP2A1O14983 1001 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms