RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 IGHA2P01877 340 aa25.37■■□□□ 1.65
CCDC78-215ENST00000538176 SLC1A4P43007 532 aa25.37■■□□□ 1.65
CCDC78-215ENST00000538176 LRRC47Q8N1G4 583 aaKnown RBP25.37■■□□□ 1.65
CCDC78-215ENST00000538176 PAWRQ96IZ0 340 aaKnown RBP25.37■■□□□ 1.65
CCDC78-215ENST00000538176 IL17RBQ9NRM6 502 aa25.37■■□□□ 1.65
CCDC78-215ENST00000538176 FLRT1Q9NZU1 646 aa25.37■■□□□ 1.65
CCDC78-215ENST00000538176 ZNF213O14771 459 aa25.36■■□□□ 1.65
CCDC78-215ENST00000538176 STAT2P52630 851 aa25.36■■□□□ 1.65
CCDC78-215ENST00000538176 AKNAD1Q5T1N1 836 aa25.36■■□□□ 1.65
CCDC78-215ENST00000538176 TTC14Q96N46 770 aa25.36■■□□□ 1.65
CCDC78-215ENST00000538176 SLC38A10Q9HBR0 1119 aa25.36■■□□□ 1.65
CCDC78-215ENST00000538176 NRBP1Q9UHY1 535 aa25.36■■□□□ 1.65
CCDC78-215ENST00000538176 COBLO75128 1261 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 CCND3P30281 292 aaPredicted RBP25.35■■□□□ 1.65
CCDC78-215ENST00000538176 LHX8Q68G74 356 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 SNRNP48Q6IEG0 339 aaKnown RBP25.35■■□□□ 1.65
CCDC78-215ENST00000538176 RCSD1Q6JBY9 416 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 STAG1Q8WVM7 1258 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 KIFC2Q96AC6 838 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 DSCC1Q9BVC3 393 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 INCENPQ9NQS7 918 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 FBXO40Q9UH90 709 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 CTNNA3Q9UI47 895 aa25.35■■□□□ 1.65
CCDC78-215ENST00000538176 MAML3Q96JK9 1138 aa25.34■■□□□ 1.65
CCDC78-215ENST00000538176 DDX20Q9UHI6 824 aaKnown RBP25.34■■□□□ 1.65
CCDC78-215ENST00000538176 COL11A1P12107 1806 aaPredicted RBP25.34■■□□□ 1.65
CCDC78-215ENST00000538176 TMEM232C9JQI7 657 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 EVI5O60447 810 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 CNGA1P29973 690 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 CYP2C19P33261 490 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 IRX6P78412 446 aaPredicted RBP25.33■■□□□ 1.65
CCDC78-215ENST00000538176 CCDC178Q5BJE1 867 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 RRP12Q5JTH9 1297 aaKnown RBP25.33■■□□□ 1.65
CCDC78-215ENST00000538176 TTC22Q5TAA0 569 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.33■■□□□ 1.65
CCDC78-215ENST00000538176 MSL3Q8N5Y2 521 aaKnown RBP25.33■■□□□ 1.65
CCDC78-215ENST00000538176 CHST13Q8NET6 341 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 ESR2Q92731 530 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 C11orf49Q9H6J7 331 aa25.33■■□□□ 1.65
CCDC78-215ENST00000538176 ZNFX1Q9P2E3 1918 aaKnown RBP25.32■■□□□ 1.64
CCDC78-215ENST00000538176 TOP1P11387 765 aaKnown RBP25.32■■□□□ 1.64
CCDC78-215ENST00000538176 CYBAP13498 195 aa25.32■■□□□ 1.64
CCDC78-215ENST00000538176 MCCP23508 829 aa25.32■■□□□ 1.64
CCDC78-215ENST00000538176 CPXCR1Q8N123 301 aa25.32■■□□□ 1.64
CCDC78-215ENST00000538176 DCAF4Q8WV16 495 aa25.32■■□□□ 1.64
CCDC78-215ENST00000538176 RUFY2Q8WXA3 655 aa25.32■■□□□ 1.64
CCDC78-215ENST00000538176 DDX11Q96FC9 970 aa25.32■■□□□ 1.64
CCDC78-215ENST00000538176 HAND2P61296 217 aa25.31■■□□□ 1.64
CCDC78-215ENST00000538176 IKQ13123 557 aaPredicted RBP25.31■■□□□ 1.64
CCDC78-215ENST00000538176 ISY1Q9ULR0 285 aaKnown RBP25.31■■□□□ 1.64
CCDC78-215ENST00000538176 TACC3Q9Y6A5 838 aa25.31■■□□□ 1.64
CCDC78-215ENST00000538176 H0YGN5 161 aa25.3■■□□□ 1.64
CCDC78-215ENST00000538176 SEPT4O43236 478 aa25.3■■□□□ 1.64
CCDC78-215ENST00000538176 NMT2O60551 498 aa25.3■■□□□ 1.64
CCDC78-215ENST00000538176 PDE4AP27815 886 aa25.3■■□□□ 1.64
CCDC78-215ENST00000538176 IMMTQ16891 758 aaKnown RBP25.3■■□□□ 1.64
CCDC78-215ENST00000538176 ZNF792Q3KQV3 632 aa25.3■■□□□ 1.64
CCDC78-215ENST00000538176 MNX1P50219 401 aaPredicted RBP25.29■■□□□ 1.64
CCDC78-215ENST00000538176 TKFCQ3LXA3 575 aa25.29■■□□□ 1.64
CCDC78-215ENST00000538176 ARRDC4Q8NCT1 418 aa25.29■■□□□ 1.64
CCDC78-215ENST00000538176 TINF2Q9BSI4 451 aa25.29■■□□□ 1.64
CCDC78-215ENST00000538176 RAVER2Q9HCJ3 691 aaKnown RBP25.29■■□□□ 1.64
CCDC78-215ENST00000538176 RAD50Q92878 1312 aa25.29■■□□□ 1.64
CCDC78-215ENST00000538176 IQCA1Q86XH1 822 aa25.28■■□□□ 1.64
CCDC78-215ENST00000538176 DGKHQ86XP1 1220 aa25.28■■□□□ 1.64
CCDC78-215ENST00000538176 DIS3LQ8TF46 1054 aaKnown RBP25.28■■□□□ 1.64
CCDC78-215ENST00000538176 TMEM47Q9BQJ4 181 aa25.28■■□□□ 1.64
CCDC78-215ENST00000538176 PNMA2Q9UL42 364 aa25.28■■□□□ 1.64
CCDC78-215ENST00000538176 RIPK3Q9Y572 518 aa25.28■■□□□ 1.64
CCDC78-215ENST00000538176 PGK2P07205 417 aa25.27■■□□□ 1.64
CCDC78-215ENST00000538176 ZNF467Q7Z7K2 595 aaPredicted RBP25.27■■□□□ 1.64
CCDC78-215ENST00000538176 ANKRD35Q8N283 1001 aa25.27■■□□□ 1.64
CCDC78-215ENST00000538176 DNAJC25-GNG10A0A024R161 153 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 COL6A1P12109 1028 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 GSPT1P15170 499 aaKnown RBP25.26■■□□□ 1.63
CCDC78-215ENST00000538176 BTNL9Q6UXG8 535 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 KCTD1Q719H9 257 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 TRPV1Q8NER1 839 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 KRT23Q9C075 422 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 CNNM2Q9H8M5 875 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 CNPY2Q9Y2B0 182 aa25.26■■□□□ 1.63
CCDC78-215ENST00000538176 DNM1LO00429 736 aa25.25■■□□□ 1.63
CCDC78-215ENST00000538176 SLC4A3P48751 1232 aa25.25■■□□□ 1.63
CCDC78-215ENST00000538176 MAMDC4Q6UXC1 1216 aa25.25■■□□□ 1.63
CCDC78-215ENST00000538176 TBC1D10CQ8IV04 446 aa25.25■■□□□ 1.63
CCDC78-215ENST00000538176 ACAD9Q9H845 621 aa25.25■■□□□ 1.63
CCDC78-215ENST00000538176 PRR12Q9ULL5 1215 aa25.25■■□□□ 1.63
CCDC78-215ENST00000538176 SYNGAP1Q96PV0 1343 aa25.25■■□□□ 1.63
CCDC78-215ENST00000538176 CCDC96Q2M329 555 aa25.24■■□□□ 1.63
CCDC78-215ENST00000538176 HABP4Q5JVS0 413 aaKnown RBP25.23■■□□□ 1.63
CCDC78-215ENST00000538176 GPATCH4Q5T3I0 446 aaKnown RBP25.22■■□□□ 1.63
CCDC78-215ENST00000538176 ANKS1AQ92625 1134 aa25.22■■□□□ 1.63
CCDC78-215ENST00000538176 PLXNA1Q9UIW2 1896 aa25.21■■□□□ 1.63
CCDC78-215ENST00000538176 CEP290O15078 2479 aa25.21■■□□□ 1.63
CCDC78-215ENST00000538176 PFASO15067 1338 aa25.21■■□□□ 1.63
CCDC78-215ENST00000538176 ZNF536O15090 1300 aa25.21■■□□□ 1.63
CCDC78-215ENST00000538176 RARBP10826 455 aa25.21■■□□□ 1.63
CCDC78-215ENST00000538176 PDHBP11177 359 aa25.21■■□□□ 1.63
CCDC78-215ENST00000538176 CHMLP26374 656 aa25.21■■□□□ 1.63
CCDC78-215ENST00000538176 PRAMEF19Q5SWL8 479 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms