RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 RNF214Q8ND24 703 aa8.28□□□□□ -1.08
MSH6-209ENST00000538136 KLRG1Q96E93 195 aa8.28□□□□□ -1.08
MSH6-209ENST00000538136 SPC25Q9HBM1 224 aa8.28□□□□□ -1.08
MSH6-209ENST00000538136 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
MSH6-209ENST00000538136 KLRG2A4D1S0 409 aaPredicted RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 SHMT1P34896 483 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 GTF2A2P52657 109 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 RNF207Q6ZRF8 634 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 PRPF38AQ8NAV1 312 aaKnown RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 LENG1Q96BZ8 264 aaPredicted RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 BRPF3Q9ULD4 1205 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 NOL7Q9UMY1 257 aaKnown RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 RIC1Q4ADV7 1423 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 VWA3AA6NCI4 1184 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 PTGS1P23219 599 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 HERVK_113P62684 666 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 CNTN2Q02246 1040 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 SREBF2Q12772 1141 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 GPIHBP1Q8IV16 184 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 AMNQ9BXJ7 453 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 ZBBXA8MT70 800 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 HSPA1AP0DMV8 641 aaKnown RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 HSPA1BP0DMV9 641 aaKnown RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 FCER1AP12319 257 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 CDK11BP21127 795 aaKnown RBP8.27□□□□□ -1.09
MSH6-209ENST00000538136 JAG1P78504 1218 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 TMEM62Q0P6H9 643 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 CST9Q5W186 159 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 SAPCD2Q86UD0 394 aa8.27□□□□□ -1.09
MSH6-209ENST00000538136 BRWD3Q6RI45 1802 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 WDR33Q9C0J8 1336 aaKnown RBP8.26□□□□□ -1.09
MSH6-209ENST00000538136 KIF3CO14782 793 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 MYL3P08590 195 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 UBA7P41226 1012 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 ADGRF4Q8IZF3 695 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 GPRC5AQ8NFJ5 357 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 IPO9Q96P70 1041 aaKnown RBP8.26□□□□□ -1.09
MSH6-209ENST00000538136 PARK7Q99497 189 aaKnown RBP8.26□□□□□ -1.09
MSH6-209ENST00000538136 MMP19Q99542 508 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 VCPKMTQ9H867 229 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 PRR12Q9ULL5 1215 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 CUL9Q8IWT3 2517 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 GCOM1H8Y6P7 765 aaPredicted RBP8.26□□□□□ -1.09
MSH6-209ENST00000538136 CTSHP09668 335 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 POLR2MP0CAP2 368 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 SP3Q02447 781 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 RRP1BQ14684 758 aaKnown RBP8.26□□□□□ -1.09
MSH6-209ENST00000538136 TPH2Q8IWU9 490 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 TMEM87BQ96K49 555 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 FTOQ9C0B1 505 aaKnown RBP eCLIP8.26□□□□□ -1.09
MSH6-209ENST00000538136 TBC1D7Q9P0N9 293 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 RP1L1Q8IWN7 2480 aaPredicted RBP8.26□□□□□ -1.09
MSH6-209ENST00000538136 LMO7Q8WWI1 1683 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 GUCY1A2P33402 732 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 HSPA4P34932 840 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 FLT3LGP49771 235 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 ADCY7P51828 1080 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 CRHR2Q13324 411 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 GNASQ5JWF2 1037 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 NBPF11Q86T75 865 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 REXO1Q8N1G1 1221 aaKnown RBP8.26□□□□□ -1.09
MSH6-209ENST00000538136 ARHGAP39Q9C0H5 1083 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 SUGT1Q9Y2Z0 365 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 NCOR1O75376 2440 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 C4BP0C0L5 1744 aa8.26□□□□□ -1.09
MSH6-209ENST00000538136 MEIS1O00470 390 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 PGK1P00558 417 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 CDC27P30260 824 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 MAP3K11Q16584 847 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 PORCNQ9H237 461 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 MAPK8IP1Q9UQF2 711 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 TAF1P21675 1872 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 TPRP12270 2363 aaKnown RBP8.25□□□□□ -1.09
MSH6-209ENST00000538136 NFIBO00712 420 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 HSPA6P17066 643 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 PDCP20941 246 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 PDIA3P30101 505 aaKnown RBP8.25□□□□□ -1.09
MSH6-209ENST00000538136 CACNB1Q02641 598 aaPredicted RBP8.25□□□□□ -1.09
MSH6-209ENST00000538136 SCRN1Q12765 414 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 CCDC73Q6ZRK6 1079 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 CERS3Q8IU89 383 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 TNS4Q8IZW8 715 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 NEDD1Q8NHV4 660 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 SPATA32Q96LK8 384 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 PCMTD1Q96MG8 357 aaPredicted RBP8.25□□□□□ -1.09
MSH6-209ENST00000538136 DEFB118Q96PH6 123 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 APOL6Q9BWW8 343 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 ABCB11O95342 1321 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 CCDC12Q8WUD4 166 aaPredicted RBP8.25□□□□□ -1.09
MSH6-209ENST00000538136 WNK4Q96J92 1243 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 PRKAG2Q9UGJ0 569 aa8.25□□□□□ -1.09
MSH6-209ENST00000538136 UPP2O95045 317 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 PKP1Q13835 747 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 ENOX2Q16206 610 aaKnown RBP8.24□□□□□ -1.09
MSH6-209ENST00000538136 KRT40Q6A162 431 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 DRC7Q8IY82 874 aa8.24□□□□□ -1.09
MSH6-209ENST00000538136 BRI3BPQ8WY22 251 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms