RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
SNHG1-206ENST00000537925 BTBD7Q9P203 1132 aa13.43□□□□□ -0.26
SNHG1-206ENST00000537925 PPP1R9AQ9ULJ8 1098 aa13.43□□□□□ -0.26
SNHG1-206ENST00000537925 PLXNA1Q9UIW2 1896 aa13.43□□□□□ -0.26
SNHG1-206ENST00000537925 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 HSPA4P34932 840 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 FCGRTP55899 365 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 SEC23AQ15436 765 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 RNF20Q5VTR2 975 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 FBXO46Q6PJ61 603 aaPredicted RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 RALYLQ86SE5 291 aaKnown RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 MB21D1Q8N884 522 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 TMX3Q96JJ7 454 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 ZNF236Q9UL36 1845 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 PLA2G6O60733 806 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 SLC1A4P43007 532 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 NEK4P51957 841 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 PRMT2P55345 433 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 TSGA10IPQ3SY00 556 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 RASGRP2Q7LDG7 609 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 PRPF38AQ8NAV1 312 aaKnown RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 DCAF4Q8WV16 495 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 KCNB2Q92953 911 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 SLF1Q9BQI6 1058 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 UBAC1Q9BSL1 405 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 LMBRD1Q9NUN5 540 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 SRRDQ9UH36 339 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 FEM1BQ9UK73 627 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 PTPN22Q9Y2R2 807 aa13.42□□□□□ -0.26
SNHG1-206ENST00000537925 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
SNHG1-206ENST00000537925 TNRC18O15417 2968 aaPredicted RBP13.41□□□□□ -0.26
SNHG1-206ENST00000537925 VWA5AO00534 786 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 TNPO2O14787 897 aaKnown RBP13.41□□□□□ -0.26
SNHG1-206ENST00000537925 SNHG28P0DPA3 235 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 ANTXR2P58335 489 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 COL9A3Q14050 684 aaPredicted RBP13.41□□□□□ -0.26
SNHG1-206ENST00000537925 TMEM132BQ14DG7 1078 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 PNMA1Q8ND90 353 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 PORCNQ9H237 461 aa13.41□□□□□ -0.26
SNHG1-206ENST00000537925 PDE4DIPQ5VU43 2346 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 TMEM232C9JQI7 657 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 BRD1O95696 1058 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 PDHBP11177 359 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 HOXD10P28358 340 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 MAPK4P31152 587 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 STAT2P52630 851 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 CCNA1P78396 465 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 KCTD1Q719H9 257 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 CHST3Q7LGC8 479 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 FAM160B2Q86V87 743 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 CHURC1Q8WUH1 139 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 PANK2Q9BZ23 570 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 SPATC1LQ9H0A9 340 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 ZNF214Q9UL59 606 aaPredicted RBP13.4□□□□□ -0.26
SNHG1-206ENST00000537925 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
SNHG1-206ENST00000537925 BAZ2BQ9UIF8 2168 aaKnown RBP13.4□□□□□ -0.26
SNHG1-206ENST00000537925 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
SNHG1-206ENST00000537925 IFIT3O14879 490 aaKnown RBP13.39□□□□□ -0.27
SNHG1-206ENST00000537925 MBD3O95983 291 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 MCM5P33992 734 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 CLCN1P35523 988 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 IFIT1BQ5T764 474 aaKnown RBP13.39□□□□□ -0.27
SNHG1-206ENST00000537925 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
SNHG1-206ENST00000537925 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
SNHG1-206ENST00000537925 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 GAS2L3Q86XJ1 694 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 KIFC2Q96AC6 838 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 COA7Q96BR5 231 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 MOV10L1Q9BXT6 1211 aaKnown RBP13.39□□□□□ -0.27
SNHG1-206ENST00000537925 KAT14Q9H8E8 782 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 GABRQQ9UN88 632 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
SNHG1-206ENST00000537925 ERICH2A1L162 156 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 FDX1P10109 184 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 ZKSCAN1P17029 563 aaPredicted RBP13.38□□□□□ -0.27
SNHG1-206ENST00000537925 PRKCZQ05513 592 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 ZNF543Q08ER8 600 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 CCDC173Q0VFZ6 552 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 KRT32Q14532 448 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
SNHG1-206ENST00000537925 CCDC96Q2M329 555 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 ADCK5Q3MIX3 580 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 GPR142Q7Z601 462 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 PTCH2Q9Y6C5 1203 aa13.38□□□□□ -0.27
SNHG1-206ENST00000537925 PRC1O43663 620 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms