RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 KDRP35968 1356 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 KIF24Q5T7B8 1368 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PARD3Q8TEW0 1356 aa3.37□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FAM208AQ9UK61 1670 aaKnown RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MAP2P11137 1827 aaKnown RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DCDC2CA8MYV0 355 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 HMGB1P1B2RPK0 211 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 KCNQ3O43525 872 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DIAPH1O60610 1272 aaKnown RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RNGTTO60942 597 aaKnown RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 BMP3P12645 472 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 HCLS1P14317 486 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PHKG2P15735 406 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NME2P22392 152 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 GBP2P32456 591 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LIG3P49916 1009 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FANCCQ00597 558 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RAD51AP2Q09MP3 1159 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 R3HDM1Q15032 1099 aaKnown RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TAF1CQ15572 869 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TXNRD1Q16881 649 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ZNF827Q17R98 1081 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SGO2Q562F6 1265 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RPS26P11Q5JNZ5 115 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RASIP1Q5U651 963 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ANKRD34AQ69YU3 496 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 GPBAR1Q8TDU6 330 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FBLIM1Q8WUP2 373 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 JARID2Q92833 1246 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ELMO3Q96BJ8 720 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 WDR18Q9BV38 432 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NRSN2Q9GZP1 204 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PRKRIP1Q9H875 184 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ZFYVE1Q9HBF4 777 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ATG3Q9NT62 314 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 GGT7Q9UJ14 662 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PCDHA4Q9UN74 947 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 KDM6AO15550 1401 aaPredicted RBP3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TNS2Q63HR2 1409 aa3.36□□□□□ -1.87
TNFRSF1A-210ENST00000537842 KAT6BQ8WYB5 2073 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LTN1O94822 1766 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ABCC6O95255 1503 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LRRC37A3O60309 1634 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MINDY4BA8MYZ0 360 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TM4SF5O14894 197 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TLR3O15455 904 aaKnown RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DHX15O43143 795 aaKnown RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 AOC2O75106 756 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ARNTP27540 789 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ZNF76P36508 570 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ASPAP45381 313 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SLC39A6Q13433 755 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ITPK1Q13572 414 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 DCTN1Q14203 1278 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 WIPI1Q5MNZ9 446 aaPredicted RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 EXOSC6Q5RKV6 272 aaKnown RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SNAP47Q5SQN1 464 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 C9orf131Q5VYM1 1079 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NOL8Q76FK4 1167 aaKnown RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NT5DC4Q86YG4 428 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 FBXL6Q8N531 539 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RAPGEF4Q8WZA2 1011 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 RNF34Q969K3 372 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 UBL7Q96S82 380 aaPredicted RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 THUMPD2Q9BTF0 503 aaKnown RBP3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 EMILIN2Q9BXX0 1053 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TMPRSS13Q9BYE2 586 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 TGIF2Q9GZN2 237 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SEMA6BQ9H3T3 888 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PCDHB5Q9Y5E4 795 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PCDHGB7Q9Y5F8 929 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ACTL7BQ9Y614 415 aa3.35□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PARP4Q9UKK3 1724 aaKnown RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PRAMEF22A3QJZ6 481 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 U2SURPO15042 1029 aaKnown RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ZNF862O60290 1169 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 BPNT1O95861 308 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 U2AF1L5P0DN76 240 aaPredicted RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ATP2B1P20020 1258 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PRKAR2BP31323 418 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ZEB1P37275 1124 aaPredicted RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 CDK8P49336 464 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 U2AF1Q01081 240 aaKnown RBP eCLIP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ID3Q02535 119 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SOX4Q06945 474 aaPredicted RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LRRC14Q15048 493 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 NFKBIBQ15653 356 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 PPM1JQ5JR12 505 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 ZNF530Q6P9A1 599 aaPredicted RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 BEND4Q6ZU67 534 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SV2BQ7L1I2 683 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 HS2ST1Q7LGA3 356 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 C12orf40Q86WS4 652 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 VPS37DQ86XT2 251 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 IFNL2Q8IZJ0 200 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 C2CD4AQ8NCU7 369 aaPredicted RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 LINC00116Q8NCU8 138 aa3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 SYTL4Q96C24 671 aaPredicted RBP3.34□□□□□ -1.87
TNFRSF1A-210ENST00000537842 MYRFLQ96LU7 910 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms