RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 OS9Q13438 667 aaPredicted RBP22.67■■□□□ 1.22
USP30-209ENST00000536723 TRMT2AQ8IZ69 625 aaKnown RBP22.67■■□□□ 1.22
USP30-209ENST00000536723 MSL3Q8N5Y2 521 aaKnown RBP22.67■■□□□ 1.22
USP30-209ENST00000536723 PCSK9Q8NBP7 692 aaKnown RBP22.67■■□□□ 1.22
USP30-209ENST00000536723 ARHGAP45Q92619 1136 aa22.67■■□□□ 1.22
USP30-209ENST00000536723 ARHGEF10LQ9HCE6 1279 aa22.67■■□□□ 1.22
USP30-209ENST00000536723 ZHX1Q9UKY1 873 aaPredicted RBP22.67■■□□□ 1.22
USP30-209ENST00000536723 CHD7Q9P2D1 2997 aa22.67■■□□□ 1.22
USP30-209ENST00000536723 VWA5AO00534 786 aa22.66■■□□□ 1.22
USP30-209ENST00000536723 TLR3O15455 904 aaKnown RBP22.66■■□□□ 1.22
USP30-209ENST00000536723 CD4P01730 458 aa22.66■■□□□ 1.22
USP30-209ENST00000536723 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
USP30-209ENST00000536723 MYOGP15173 224 aa22.66■■□□□ 1.22
USP30-209ENST00000536723 PPP2R2DQ66LE6 453 aa22.66■■□□□ 1.22
USP30-209ENST00000536723 CCDC8Q9H0W5 538 aaPredicted RBP22.66■■□□□ 1.22
USP30-209ENST00000536723 ZNF214Q9UL59 606 aaPredicted RBP22.66■■□□□ 1.22
USP30-209ENST00000536723 ADCY6O43306 1168 aa22.65■■□□□ 1.22
USP30-209ENST00000536723 CYP2D6P10635 497 aa22.65■■□□□ 1.22
USP30-209ENST00000536723 AKR1B1P15121 316 aa22.65■■□□□ 1.22
USP30-209ENST00000536723 ICA1Q05084 483 aa22.65■■□□□ 1.22
USP30-209ENST00000536723 POLA2Q14181 598 aa22.65■■□□□ 1.22
USP30-209ENST00000536723 MAMDC4Q6UXC1 1216 aa22.65■■□□□ 1.22
USP30-209ENST00000536723 SH2D4AQ9H788 454 aa22.65■■□□□ 1.22
USP30-209ENST00000536723 MAGEB6P1A0A0J9YX57 407 aa22.64■■□□□ 1.21
USP30-209ENST00000536723 REPS2Q8NFH8 660 aa22.64■■□□□ 1.21
USP30-209ENST00000536723 DYNLL2Q96FJ2 89 aa22.64■■□□□ 1.21
USP30-209ENST00000536723 REV3LO60673 3130 aa22.64■■□□□ 1.21
USP30-209ENST00000536723 UMODL1Q5DID0 1318 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 RFXAPO00287 272 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 SURF6O75683 361 aaKnown RBP22.63■■□□□ 1.21
USP30-209ENST00000536723 COPB2P35606 906 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 GJA9P57773 515 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 ACVR2BQ13705 512 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 GNASQ5JWF2 1037 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 TMED8Q6PL24 325 aaPredicted RBP22.63■■□□□ 1.21
USP30-209ENST00000536723 EAF2Q96CJ1 260 aaPredicted RBP22.63■■□□□ 1.21
USP30-209ENST00000536723 CRNKL1Q9BZJ0 848 aaKnown RBP22.63■■□□□ 1.21
USP30-209ENST00000536723 UPF3AQ9H1J1 476 aaKnown RBP22.63■■□□□ 1.21
USP30-209ENST00000536723 SPC25Q9HBM1 224 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 C11orf16Q9NQ32 467 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 SWAP70Q9UH65 585 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 PPP1R9AQ9ULJ8 1098 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 PCDHA11Q9Y5I1 949 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 MTCH2Q9Y6C9 303 aa22.63■■□□□ 1.21
USP30-209ENST00000536723 TLL1O43897 1013 aa22.62■■□□□ 1.21
USP30-209ENST00000536723 RARSP54136 660 aaKnown RBP22.62■■□□□ 1.21
USP30-209ENST00000536723 SDR42E1Q8WUS8 393 aa22.62■■□□□ 1.21
USP30-209ENST00000536723 KHSRPQ92945 711 aaKnown RBP eCLIP22.62■■□□□ 1.216e-8■■□□□ 13.9
USP30-209ENST00000536723 DDX11Q96FC9 970 aa22.62■■□□□ 1.21
USP30-209ENST00000536723 HIPK3Q9H422 1215 aa22.62■■□□□ 1.21
USP30-209ENST00000536723 SLC4A7Q9Y6M7 1214 aa22.62■■□□□ 1.21
USP30-209ENST00000536723 DNAJC25-GNG10A0A024R161 153 aa22.61■■□□□ 1.21
USP30-209ENST00000536723 CTAGE5O15320 804 aa22.61■■□□□ 1.21
USP30-209ENST00000536723 GPR37L1O60883 481 aa22.61■■□□□ 1.21
USP30-209ENST00000536723 POU3F3P20264 500 aaPredicted RBP22.61■■□□□ 1.21
USP30-209ENST00000536723 CCL23P55773 120 aa22.61■■□□□ 1.21
USP30-209ENST00000536723 CCDC144BQ3MJ40 725 aa22.61■■□□□ 1.21
USP30-209ENST00000536723 ALYREFQ86V81 257 aaKnown RBP22.61■■□□□ 1.21
USP30-209ENST00000536723 DCP1AQ9NPI6 582 aaPredicted RBP22.61■■□□□ 1.21
USP30-209ENST00000536723 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.61■■□□□ 1.21
USP30-209ENST00000536723 TNNQ9UQP3 1299 aa22.61■■□□□ 1.21
USP30-209ENST00000536723 FAM86C2PA6NEL3 165 aa22.6■■□□□ 1.21
USP30-209ENST00000536723 SSH3Q8TE77 659 aa22.6■■□□□ 1.21
USP30-209ENST00000536723 RIPK3Q9Y572 518 aa22.6■■□□□ 1.21
USP30-209ENST00000536723 PARP14Q460N5 1801 aa22.59■■□□□ 1.21
USP30-209ENST00000536723 EEF2P13639 858 aaKnown RBP22.59■■□□□ 1.21
USP30-209ENST00000536723 FAM83BQ5T0W9 1011 aa22.59■■□□□ 1.21
USP30-209ENST00000536723 ZNF467Q7Z7K2 595 aaPredicted RBP22.59■■□□□ 1.21
USP30-209ENST00000536723 SLC43A3Q8NBI5 491 aa22.59■■□□□ 1.21
USP30-209ENST00000536723 COG5Q9UP83 839 aa22.59■■□□□ 1.21
USP30-209ENST00000536723 GBF1Q92538 1859 aa22.59■■□□□ 1.21
USP30-209ENST00000536723 COL11A1P12107 1806 aaPredicted RBP22.59■■□□□ 1.21
USP30-209ENST00000536723 PIEZO1Q92508 2521 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 SMIM22K7EJ46 135 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 GTPBP6O43824 516 aaPredicted RBP22.58■■□□□ 1.21
USP30-209ENST00000536723 BCAR3O75815 825 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 ATP8B2P98198 1209 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 BEX3Q00994 111 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 VWCEQ96DN2 955 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 TEX13BQ9BXU2 312 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 WNT8AQ9H1J5 351 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 ABHD16BQ9H3Z7 469 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 CERS4Q9HA82 394 aa22.58■■□□□ 1.21
USP30-209ENST00000536723 TRIM27P14373 513 aa22.57■■□□□ 1.2
USP30-209ENST00000536723 ATP2A2P16615 1042 aaKnown RBP22.57■■□□□ 1.2
USP30-209ENST00000536723 SLC9C2Q5TAH2 1124 aa22.57■■□□□ 1.2
USP30-209ENST00000536723 KRT40Q6A162 431 aa22.57■■□□□ 1.2
USP30-209ENST00000536723 SNRNP48Q6IEG0 339 aaKnown RBP22.57■■□□□ 1.2
USP30-209ENST00000536723 CXCL17Q6UXB2 119 aa22.57■■□□□ 1.2
USP30-209ENST00000536723 LCORLQ8N3X6 602 aa22.57■■□□□ 1.2
USP30-209ENST00000536723 CCDC17Q96LX7 622 aa22.57■■□□□ 1.2
USP30-209ENST00000536723 NOC4LQ9BVI4 516 aaKnown RBP22.57■■□□□ 1.2
USP30-209ENST00000536723 PRRC2BQ5JSZ5 2229 aaKnown RBP22.57■■□□□ 1.2
USP30-209ENST00000536723 NAV1Q8NEY1 1877 aa22.56■■□□□ 1.2
USP30-209ENST00000536723 EPOPA6NHQ4 379 aa22.56■■□□□ 1.2
USP30-209ENST00000536723 ZBBXA8MT70 800 aa22.56■■□□□ 1.2
USP30-209ENST00000536723 RAD21O60216 631 aa22.56■■□□□ 1.2
USP30-209ENST00000536723 PDE6AP16499 860 aa22.56■■□□□ 1.2
USP30-209ENST00000536723 NKX3-2P78367 333 aa22.56■■□□□ 1.2
USP30-209ENST00000536723 RPUSD2Q8IZ73 545 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms