RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 EARS2Q5JPH6 523 aaKnown RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 JMYQ8N9B5 988 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 ACER1Q8TDN7 264 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 SPON1Q9HCB6 807 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 PI4KBQ9UBF8 816 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 ZNRF3Q9ULT6 936 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 TCHHQ07283 1943 aa9.34□□□□□ -0.91
ABCA4-207ENST00000536513 MYO5AQ9Y4I1 1855 aaKnown RBP9.34□□□□□ -0.91
ABCA4-207ENST00000536513 DDX39AO00148 427 aaKnown RBP9.33□□□□□ -0.92
ABCA4-207ENST00000536513 IFNAR1P17181 557 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 TROAPQ12815 778 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 PNOCQ13519 176 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 PTPN14Q15678 1187 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 EPSTI1Q96J88 318 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 FBXO28Q9NVF7 368 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 NRAPQ86VF7 1730 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 BAZ2AQ9UIF9 1905 aaKnown RBP9.33□□□□□ -0.92
ABCA4-207ENST00000536513 PP2D1A8MPX8 630 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 ADAMTS3O15072 1205 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 IDEP14735 1019 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 PTGS1P23219 599 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 STYK1Q6J9G0 422 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 TMC4Q7Z404 712 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
ABCA4-207ENST00000536513 GOLPH3LQ9H4A5 285 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 LAMB4A4D0S4 1761 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 C4BP0C0L5 1744 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 TJP1Q07157 1748 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 FOXN1O15353 648 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-207ENST00000536513 PTGDRQ13258 359 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 ANGEL2Q5VTE6 544 aaKnown RBP9.33□□□□□ -0.92
ABCA4-207ENST00000536513 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-207ENST00000536513 CDK5RAP3Q96JB5 506 aa9.33□□□□□ -0.92
ABCA4-207ENST00000536513 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 RSBN1LQ6PCB5 846 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 SMARCC2Q8TAQ2 1214 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 GLIS2Q9BZE0 524 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 WDR70Q9NW82 654 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 TYRO3Q06418 890 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 NSMFQ6X4W1 530 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 SMYD4Q8IYR2 804 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 PEX10O60683 326 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 ZNF202O95125 648 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 TTLL1O95922 423 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 TOP1P11387 765 aaKnown RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 PFKFB1P16118 471 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 UBA7P41226 1012 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 EPS15P42566 896 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 TTC38Q5R3I4 469 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 TRMT44Q8IYL2 757 aaKnown RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 ZNF341Q9BYN7 854 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 CWC15Q9P013 229 aaKnown RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 ZNF70Q9UC06 446 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-207ENST00000536513 PCDHA1Q9Y5I3 950 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 RFX7Q2KHR2 1363 aa9.32□□□□□ -0.92
ABCA4-207ENST00000536513 ADAMTS7Q9UKP4 1686 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 MMP1P03956 469 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 SEC23AQ15436 765 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 FAM83BQ5T0W9 1011 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 TCEAL9Q9UHQ7 104 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 UBR2Q8IWV8 1755 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 MYH13Q9UKX3 1938 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 MYCNP04198 464 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-207ENST00000536513 TECP42680 631 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 RCSD1Q6JBY9 416 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 MAEAQ7L5Y9 396 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 SGMS1Q86VZ5 419 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 AOPEPQ8N6M6 819 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 UPF1Q92900 1129 aaKnown RBP eCLIP9.31□□□□□ -0.92
ABCA4-207ENST00000536513 RTEL1Q9NZ71 1219 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 NWD2Q9ULI1 1742 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 F5H6K3 240 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 WNT10BO00744 389 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 KLRC3Q07444 240 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 SPP2Q13103 211 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 NTRK3Q16288 839 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 WWC2Q6AWC2 1192 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 C10orf67Q8IYJ2 551 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 LINC00301Q8NCQ3 95 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 KCNG4Q8TDN1 519 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 RBM28Q9NW13 759 aaKnown RBP9.31□□□□□ -0.92
ABCA4-207ENST00000536513 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
ABCA4-207ENST00000536513 WNT7AO00755 349 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 KRT18P05783 430 aaKnown RBP9.3□□□□□ -0.92
ABCA4-207ENST00000536513 ALAS1P13196 640 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 INPP5BP32019 993 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 NBPF12Q5TAG4 269 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-207ENST00000536513 BLIDQ8IZY5 108 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 UBXN4Q92575 508 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 WRNIP1Q96S55 665 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 CSRNP2Q9H175 543 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 MYOZ2Q9NPC6 264 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 GGA3Q9NZ52 723 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 SERTAD1Q9UHV2 236 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 KCNH3Q9ULD8 1083 aa9.3□□□□□ -0.92
ABCA4-207ENST00000536513 SAMM50Q9Y512 469 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms