RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 DPF3Q92784 378 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 PPP1R9AQ9ULJ8 1098 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
CCDC60-202ENST00000535685 F5H6K3 240 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 VWA5AO00534 786 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 MSCO60682 206 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
CCDC60-202ENST00000535685 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
CCDC60-202ENST00000535685 KLRC3Q07444 240 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 PPARAQ07869 468 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 TMEM132BQ14DG7 1078 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 NPLOC4Q8TAT6 608 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
CCDC60-202ENST00000535685 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 NAPBQ9H115 298 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 SLC5A4Q9NY91 659 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 MTMR4Q9NYA4 1195 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 FLRT1Q9NZU1 646 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 ANAPC4Q9UJX5 808 aa12.85□□□□□ -0.35
CCDC60-202ENST00000535685 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
CCDC60-202ENST00000535685 ATP2A1O14983 1001 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 TTLL1O95922 423 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 FGRP09769 529 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 ADORA2AP29274 412 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 ATP2B2Q01814 1243 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 FAM83BQ5T0W9 1011 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 SMYD5Q6GMV2 418 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
CCDC60-202ENST00000535685 GMCL1P1Q8NEA9 526 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 YTHDC1Q96MU7 727 aaKnown RBP12.84□□□□□ -0.35
CCDC60-202ENST00000535685 PRO3102Q9H379 93 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 FBXO28Q9NVF7 368 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
CCDC60-202ENST00000535685 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
CCDC60-202ENST00000535685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC60-202ENST00000535685 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
CCDC60-202ENST00000535685 COBLO75128 1261 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 NDUFB10O96000 172 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 COL6A1P12109 1028 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 CYBAP13498 195 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 CCND3P30281 292 aaPredicted RBP12.83□□□□□ -0.36
CCDC60-202ENST00000535685 STAT3P40763 770 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 NOVP48745 357 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 PRPF38AQ8NAV1 312 aaKnown RBP12.83□□□□□ -0.36
CCDC60-202ENST00000535685 DIS3LQ8TF46 1054 aaKnown RBP12.83□□□□□ -0.36
CCDC60-202ENST00000535685 CEP95Q96GE4 821 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 NRBP1Q9UHY1 535 aa12.83□□□□□ -0.36
CCDC60-202ENST00000535685 MCM3APO60318 1980 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 ORC4O43929 436 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 EVI5O60447 810 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 PLA2G6O60733 806 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 PRDM1O75626 825 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 FDX1P10109 184 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 FCER1AP12319 257 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 NUCB1Q02818 461 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 CHD1LQ86WJ1 897 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 LNPKQ9C0E8 428 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 DDX20Q9UHI6 824 aaKnown RBP12.82□□□□□ -0.36
CCDC60-202ENST00000535685 FEM1BQ9UK73 627 aa12.82□□□□□ -0.36
CCDC60-202ENST00000535685 COLQQ9Y215 455 aaPredicted RBP12.82□□□□□ -0.36
CCDC60-202ENST00000535685 DNAH12Q6ZR08 3092 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 ATMINO43313 823 aaPredicted RBP12.81□□□□□ -0.36
CCDC60-202ENST00000535685 IGHDP01880 384 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 OAZ1P54368 228 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 TFAP4Q01664 338 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 PLS1Q14651 629 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 CCDC129Q6ZRS4 1044 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 PLEKHM2Q8IWE5 1019 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 TRPV1Q8NER1 839 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 EXOC6Q8TAG9 804 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 GMCL1Q96IK5 515 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 MAML3Q96JK9 1138 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 TEX13BQ9BXU2 312 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 PFASO15067 1338 aa12.81□□□□□ -0.36
CCDC60-202ENST00000535685 A0A0D9SFI3 127 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 A0A1W2PPC1 479 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 FGAP02671 866 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 PCP11498 1178 aaKnown RBP12.8□□□□□ -0.36
CCDC60-202ENST00000535685 CYP2C19P33261 490 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 NT5C2P49902 561 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 ZNF792Q3KQV3 632 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 IER5LQ5T953 404 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
CCDC60-202ENST00000535685 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms