RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 MORF4L1Q9UBU8 362 aa15.4■□□□□ 0.06
CHFR-210ENST00000535527 SYNPO2Q9UMS6 1093 aa15.4■□□□□ 0.06
CHFR-210ENST00000535527 ADAMTS5Q9UNA0 930 aa15.4■□□□□ 0.06
CHFR-210ENST00000535527 MCM3APO60318 1980 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 FLOT1O75955 427 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 GJB1P08034 283 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 GOLGA8HP0CJ92 632 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 MNX1P50219 401 aaPredicted RBP15.39■□□□□ 0.05
CHFR-210ENST00000535527 SNAP25P60880 206 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 MTFR1Q15390 333 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 RALYLQ86SE5 291 aaKnown RBP15.39■□□□□ 0.05
CHFR-210ENST00000535527 STAG2Q8N3U4 1231 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 PNMA1Q8ND90 353 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 JAKMIP1Q96N16 626 aaKnown RBP15.39■□□□□ 0.05
CHFR-210ENST00000535527 NEK1Q96PY6 1258 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 PAGR1Q9BTK6 254 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 SRRDQ9UH36 339 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
CHFR-210ENST00000535527 IFIT3O14879 490 aaKnown RBP15.38■□□□□ 0.05
CHFR-210ENST00000535527 BMP3P12645 472 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 OSBPP22059 807 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 GRK4P32298 578 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 SLC16A2P36021 539 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
CHFR-210ENST00000535527 SMCR8Q8TEV9 937 aaPredicted RBP15.38■□□□□ 0.05
CHFR-210ENST00000535527 TRIM47Q96LD4 638 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 TTC14Q96N46 770 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 KIF2CQ99661 725 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 PNMA3Q9UL41 463 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
CHFR-210ENST00000535527 BRPF3Q9ULD4 1205 aa15.38■□□□□ 0.05
CHFR-210ENST00000535527 TMEM232C9JQI7 657 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
CHFR-210ENST00000535527 RXRAP19793 462 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 ERVK-9P63128 1117 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 ERVK-24P63145 666 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 ZNF543Q08ER8 600 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 TROAPQ12815 778 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 IQCA1Q86XH1 822 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 RAET1EQ8TD07 263 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 IL17RAQ96F46 866 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 UBAC1Q9BSL1 405 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 GPCPD1Q9NPB8 672 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 FRMPD3Q5JV73 1810 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 ZNF536O15090 1300 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 CUL9Q8IWT3 2517 aa15.37■□□□□ 0.05
CHFR-210ENST00000535527 VWA5AO00534 786 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 SLC1A4P43007 532 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 PSMC4P43686 418 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 UBXN2AP68543 259 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 TRDNQ13061 729 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 PABPC4Q13310 644 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHFR-210ENST00000535527 COG2Q14746 738 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 CCDC96Q2M329 555 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 IFIT1BQ5T764 474 aaKnown RBP15.36■□□□□ 0.05
CHFR-210ENST00000535527 RNF20Q5VTR2 975 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 DCAF4Q8WV16 495 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 SLF1Q9BQI6 1058 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 UPF3BQ9BZI7 483 aaKnown RBP15.36■□□□□ 0.05
CHFR-210ENST00000535527 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 RIPK3Q9Y572 518 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 MYPNQ86TC9 1320 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 LAMA3Q16787 3333 aa15.36■□□□□ 0.05
CHFR-210ENST00000535527 CCL5P13501 91 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 RPS6KB1P23443 525 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 MCM5P33992 734 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 NT5C2P49902 561 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 TOB2Q14106 344 aaPredicted RBP15.35■□□□□ 0.05
CHFR-210ENST00000535527 GRM4Q14833 912 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 WTAPQ15007 396 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 GPR153Q6NV75 609 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 DHX32Q7L7V1 743 aaKnown RBP15.35■□□□□ 0.05
CHFR-210ENST00000535527 ZNF654Q8IZM8 581 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 KIFC2Q96AC6 838 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
CHFR-210ENST00000535527 UBA5Q9GZZ9 404 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 RNF208Q9H0X6 261 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 PRR12Q9ULL5 1215 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 GABRQQ9UN88 632 aa15.35■□□□□ 0.05
CHFR-210ENST00000535527 CYTH3O43739 400 aa15.34■□□□□ 0.05
CHFR-210ENST00000535527 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
CHFR-210ENST00000535527 GCLCP48506 637 aaPredicted RBP15.34■□□□□ 0.05
CHFR-210ENST00000535527 LARP6Q9BRS8 491 aaKnown RBP15.34■□□□□ 0.05
CHFR-210ENST00000535527 AGXT2Q9BYV1 514 aa15.34■□□□□ 0.05
CHFR-210ENST00000535527 ZSWIM6Q9HCJ5 1215 aa15.34■□□□□ 0.05
CHFR-210ENST00000535527 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
CHFR-210ENST00000535527 WDR19Q8NEZ3 1342 aa15.34■□□□□ 0.05
CHFR-210ENST00000535527 PALM3A6NDB9 673 aaPredicted RBP15.33■□□□□ 0.04
CHFR-210ENST00000535527 PLEKHA8P1O95397 391 aa15.33■□□□□ 0.04
CHFR-210ENST00000535527 FMNL1O95466 1100 aaPredicted RBP15.33■□□□□ 0.04
CHFR-210ENST00000535527 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.04
CHFR-210ENST00000535527 STAT2P52630 851 aa15.33■□□□□ 0.04
CHFR-210ENST00000535527 SGMS1Q86VZ5 419 aa15.33■□□□□ 0.04
CHFR-210ENST00000535527 TMEM87BQ96K49 555 aa15.33■□□□□ 0.04
CHFR-210ENST00000535527 SPATC1LQ9H0A9 340 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms