RNA–Protein interactions for RNA: ENST00000535462.5

PTPN6-206, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-206ENST00000535462 SAMD1Q6SPF0 538 aaPredicted RBP18.87■□□□□ 0.61
PTPN6-206ENST00000535462 ANKRD33Q7Z3H0 272 aa18.87■□□□□ 0.61
PTPN6-206ENST00000535462 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.87■□□□□ 0.61
PTPN6-206ENST00000535462 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
PTPN6-206ENST00000535462 FAM184BQ9ULE4 1060 aa18.87■□□□□ 0.61
PTPN6-206ENST00000535462 DNAJC25-GNG10A0A024R161 153 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 A0A1W2PQ45 241 aaPredicted RBP18.86■□□□□ 0.61
PTPN6-206ENST00000535462 A0A1W2PQY0 241 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 TRIM43BA6NCK2 446 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 F5H6K3 240 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 CST5P28325 142 aaPredicted RBP18.86■□□□□ 0.61
PTPN6-206ENST00000535462 KLRC3Q07444 240 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 SLFNL1Q499Z3 407 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 PPP4R3BQ5MIZ7 849 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 SNRNP48Q6IEG0 339 aaKnown RBP18.86■□□□□ 0.61
PTPN6-206ENST00000535462 MKL1Q969V6 931 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 FERMT2Q96AC1 680 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 TRIM43Q96BQ3 446 aaPredicted RBP18.86■□□□□ 0.61
PTPN6-206ENST00000535462 DDX11Q96FC9 970 aa18.86■□□□□ 0.61
PTPN6-206ENST00000535462 PLIN4Q96Q06 1357 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 GSG1L2A8MUP6 293 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 RAD21O60216 631 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 ZBED4O75132 1171 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 DUSP11O75319 330 aaKnown RBP18.85■□□□□ 0.61
PTPN6-206ENST00000535462 RAG1P15918 1043 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 C9orf50Q5SZB4 431 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 PCSK9Q8NBP7 692 aaKnown RBP18.85■□□□□ 0.61
PTPN6-206ENST00000535462 CHST13Q8NET6 341 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 SPC25Q9HBM1 224 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 STARD7Q9NQZ5 370 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 FEM1BQ9UK73 627 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 RCAN3Q9UKA8 241 aa18.85■□□□□ 0.61
PTPN6-206ENST00000535462 CTDP1Q9Y5B0 961 aaPredicted RBP18.85■□□□□ 0.61
PTPN6-206ENST00000535462 ELP1O95163 1332 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 SYNRGQ9UMZ2 1314 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 IGKV6D-41A0A0C4DH26 115 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 DCDC2CA8MYV0 355 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 NDUFB10O96000 172 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 PGK1P00558 417 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 ZNF444Q8N0Y2 327 aaPredicted RBP18.84■□□□□ 0.61
PTPN6-206ENST00000535462 GMCL1P1Q8NEA9 526 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 KLHDC9Q8NEP7 349 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 ABHD16BQ9H3Z7 469 aa18.84■□□□□ 0.61
PTPN6-206ENST00000535462 SMIM22K7EJ46 135 aa18.83■□□□□ 0.6
PTPN6-206ENST00000535462 TTLL1O95922 423 aa18.83■□□□□ 0.6
PTPN6-206ENST00000535462 ACLYP53396 1101 aa18.83■□□□□ 0.6
PTPN6-206ENST00000535462 FPGSQ05932 587 aa18.83■□□□□ 0.6
PTPN6-206ENST00000535462 SH3RF1Q7Z6J0 888 aa18.83■□□□□ 0.6
PTPN6-206ENST00000535462 RNPC3Q96LT9 517 aaKnown RBP18.83■□□□□ 0.6
PTPN6-206ENST00000535462 GLT1D1Q96MS3 346 aa18.83■□□□□ 0.6
PTPN6-206ENST00000535462 CDX2Q99626 313 aaPredicted RBP18.83■□□□□ 0.6
PTPN6-206ENST00000535462 SLC38A10Q9HBR0 1119 aa18.83■□□□□ 0.6
PTPN6-206ENST00000535462 RNF113AO15541 343 aaKnown RBP18.82■□□□□ 0.6
PTPN6-206ENST00000535462 GPAA1O43292 621 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 TDO2P48775 406 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 CCSAPQ6IQ19 270 aaPredicted RBP18.82■□□□□ 0.6
PTPN6-206ENST00000535462 OSBP2Q969R2 916 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 SEZ6LQ9BYH1 1024 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 NACAP1Q9BZK3 213 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 TMEM39AQ9NV64 488 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
PTPN6-206ENST00000535462 MINDY4BA8MYZ0 360 aa18.81■□□□□ 0.6
PTPN6-206ENST00000535462 PQBP1O60828 265 aaKnown RBP18.81■□□□□ 0.6
PTPN6-206ENST00000535462 SNAI1O95863 264 aaPredicted RBP18.81■□□□□ 0.6
PTPN6-206ENST00000535462 CHGBP05060 677 aa18.81■□□□□ 0.6
PTPN6-206ENST00000535462 SLC3A2P08195 630 aaKnown RBP18.81■□□□□ 0.6
PTPN6-206ENST00000535462 TAL1P17542 331 aaPredicted RBP18.81■□□□□ 0.6
PTPN6-206ENST00000535462 NKX3-2P78367 333 aa18.81■□□□□ 0.6
PTPN6-206ENST00000535462 PDE4BQ07343 736 aa18.81■□□□□ 0.6
PTPN6-206ENST00000535462 FAM161BQ96MY7 647 aa18.81■□□□□ 0.6
PTPN6-206ENST00000535462 COL25A1Q9BXS0 654 aaPredicted RBP18.81■□□□□ 0.6
PTPN6-206ENST00000535462 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
PTPN6-206ENST00000535462 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
PTPN6-206ENST00000535462 TTC41PQ6P2S7 1318 aa18.8■□□□□ 0.6
PTPN6-206ENST00000535462 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.8■□□□□ 0.6
PTPN6-206ENST00000535462 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.8■□□□□ 0.6
PTPN6-206ENST00000535462 GJA9P57773 515 aa18.8■□□□□ 0.6
PTPN6-206ENST00000535462 FAAP100Q0VG06 881 aa18.8■□□□□ 0.6
PTPN6-206ENST00000535462 ACVR2BQ13705 512 aa18.8■□□□□ 0.6
PTPN6-206ENST00000535462 ANKRD35Q8N283 1001 aa18.8■□□□□ 0.6
PTPN6-206ENST00000535462 MAFAQ8NHW3 353 aaPredicted RBP18.8■□□□□ 0.6
PTPN6-206ENST00000535462 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
PTPN6-206ENST00000535462 ZHX1Q9UKY1 873 aaPredicted RBP18.8■□□□□ 0.6
PTPN6-206ENST00000535462 RIPK3Q9Y572 518 aa18.8■□□□□ 0.6
PTPN6-206ENST00000535462 VCANP13611 3396 aa18.8■□□□□ 0.6
PTPN6-206ENST00000535462 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
PTPN6-206ENST00000535462 ERC2O15083 957 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 PLA2G6O60733 806 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 TIMP1P01033 207 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 ITGB8P26012 769 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 TKFCQ3LXA3 575 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 FAM160B2Q86V87 743 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 NEDD1Q8NHV4 660 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 KIFC2Q96AC6 838 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 CEP95Q96GE4 821 aa18.79■□□□□ 0.6
PTPN6-206ENST00000535462 NUP88Q99567 741 aaPredicted RBP18.79■□□□□ 0.6
PTPN6-206ENST00000535462 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms