RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 KANSL2Q9H9L4 492 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 ARHGEF10LQ9HCE6 1279 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 ADAMTS5Q9UNA0 930 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 PLXNA1Q9UIW2 1896 aa12.06□□□□□ -0.48
CLSTN3-203ENST00000534830 BDP1A6H8Y1 2624 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 M0R2C6 588 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 KIAA0355O15063 1070 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 WDR46O15213 610 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 GPAA1O43292 621 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 EEF2P13639 858 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 PBX2P40425 430 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 MB21D1Q8N884 522 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 SHCBP1Q8NEM2 672 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 MOV10L1Q9BXT6 1211 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 SPATC1LQ9H0A9 340 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 TMEM39AQ9NV64 488 aa12.05□□□□□ -0.48
CLSTN3-203ENST00000534830 IGKV6D-41A0A0C4DH26 115 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 PATL2C9JE40 543 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 ERC2O15083 957 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 STRNO43815 780 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 GNAT2P19087 354 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 RASA1P20936 1047 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 ADORA2AP29274 412 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 FAM47AQ5JRC9 791 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 SMCHD1A6NHR9 2005 aa12.04□□□□□ -0.48
CLSTN3-203ENST00000534830 ERCC3P19447 782 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 MX1P20591 662 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 ADGRE1Q14246 886 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 ZMYM1Q5SVZ6 1142 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 SPICE1Q8N0Z3 855 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 ATG4CQ96DT6 458 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 SEC62Q99442 399 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 PBX4Q9BYU1 374 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 TANGO6Q9C0B7 1094 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 NYAP2Q9P242 653 aa12.03□□□□□ -0.48
CLSTN3-203ENST00000534830 COBLO75128 1261 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 FLOT1O75955 427 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 TMEM132BQ14DG7 1078 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 LRRFIP1Q32MZ4 808 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 ABRAQ8N0Z2 381 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 REPS2Q8NFH8 660 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 MKL1Q969V6 931 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.02□□□□□ -0.492e-7■■■□□ 16.1
CLSTN3-203ENST00000534830 LRFN3Q9BTN0 628 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 XPNPEP3Q9NQH7 507 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 PHF24Q9UPV7 400 aa12.02□□□□□ -0.49
CLSTN3-203ENST00000534830 A0A1W2PQ45 241 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 A0A1W2PQY0 241 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 MINDY4BA8MYZ0 360 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 FOXP2O15409 715 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 PGK1P00558 417 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 RARBP10826 455 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 BMP1P13497 986 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 AAMPQ13685 434 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 RNF180Q86T96 592 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 MICALL1Q8N3F8 863 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 MROH8Q9H579 483 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 MKNK2Q9HBH9 465 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 GOPCQ9HD26 462 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 SLC5A4Q9NY91 659 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
CLSTN3-203ENST00000534830 VWA5AO00534 786 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 SLC25A27O95847 323 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 PDE1AP54750 535 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 TFF2Q03403 129 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 FAAP100Q0VG06 881 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 CCDC174Q6PII3 467 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 RIOX2Q8IUF8 465 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 FSD1Q9BTV5 496 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 EPHX3Q9H6B9 360 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 MTMR4Q9NYA4 1195 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 CXXC1Q9P0U4 656 aaPredicted RBP12□□□□□ -0.49
CLSTN3-203ENST00000534830 MSRAQ9UJ68 235 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 ZNF214Q9UL59 606 aaPredicted RBP12□□□□□ -0.49
CLSTN3-203ENST00000534830 SYNPO2Q9UMS6 1093 aa12□□□□□ -0.49
CLSTN3-203ENST00000534830 F5H6K3 240 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 TIMP1P01033 207 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 TDO2P48775 406 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 KLRC3Q07444 240 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.494e-7■■□□□ 12.8
CLSTN3-203ENST00000534830 PLS1Q14651 629 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 SKIV2LQ15477 1246 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 TMEM31Q5JXX7 168 aa11.99□□□□□ -0.49
CLSTN3-203ENST00000534830 TMEM240Q5SV17 173 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms