RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 ZMYM1Q5SVZ6 1142 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 LRRC47Q8N1G4 583 aaKnown RBP21.96■■□□□ 1.11
CTSB-233ENST00000534636 GMCL1P1Q8NEA9 526 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 KIFC2Q96AC6 838 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 FEM1BQ9UK73 627 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 CNPY2Q9Y2B0 182 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 ATP11BQ9Y2G3 1177 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 SLC4A3P48751 1232 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 ZNF792Q3KQV3 632 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 FAM47AQ5JRC9 791 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 ANKRD45Q5TZF3 282 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 GPR153Q6NV75 609 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 MKL1Q969V6 931 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 DDX11Q96FC9 970 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 XPNPEP3Q9NQH7 507 aa21.95■■□□□ 1.1
CTSB-233ENST00000534636 LAMA2P24043 3122 aaKnown RBP21.94■■□□□ 1.1
CTSB-233ENST00000534636 COL6A3P12111 3177 aa21.94■■□□□ 1.1
CTSB-233ENST00000534636 ATP2A1O14983 1001 aa21.94■■□□□ 1.1
CTSB-233ENST00000534636 LRRC41Q15345 812 aa21.94■■□□□ 1.1
CTSB-233ENST00000534636 RNF180Q86T96 592 aa21.94■■□□□ 1.1
CTSB-233ENST00000534636 CPXCR1Q8N123 301 aa21.94■■□□□ 1.1
CTSB-233ENST00000534636 MSL3Q8N5Y2 521 aaKnown RBP21.94■■□□□ 1.1
CTSB-233ENST00000534636 NEDD1Q8NHV4 660 aa21.94■■□□□ 1.1
CTSB-233ENST00000534636 AKR1A1P14550 325 aa21.93■■□□□ 1.1
CTSB-233ENST00000534636 TFAP4Q01664 338 aa21.93■■□□□ 1.1
CTSB-233ENST00000534636 LTBP2Q14767 1821 aa21.93■■□□□ 1.1
CTSB-233ENST00000534636 SLFN13Q68D06 897 aa21.93■■□□□ 1.1
CTSB-233ENST00000534636 SLC39A5Q6ZMH5 540 aa21.93■■□□□ 1.1
CTSB-233ENST00000534636 CRBNQ96SW2 442 aa21.93■■□□□ 1.1
CTSB-233ENST00000534636 PRDM5Q9NQX1 630 aaPredicted RBP21.93■■□□□ 1.1
CTSB-233ENST00000534636 FBXO40Q9UH90 709 aa21.93■■□□□ 1.1
CTSB-233ENST00000534636 SYNGAP1Q96PV0 1343 aa21.92■■□□□ 1.1
CTSB-233ENST00000534636 BMP3P12645 472 aa21.92■■□□□ 1.1
CTSB-233ENST00000534636 ADCYAP1R1P41586 468 aa21.92■■□□□ 1.1
CTSB-233ENST00000534636 OAZ1P54368 228 aa21.92■■□□□ 1.1
CTSB-233ENST00000534636 IKQ13123 557 aaPredicted RBP21.92■■□□□ 1.1
CTSB-233ENST00000534636 EVI5LQ96CN4 794 aa21.92■■□□□ 1.1
CTSB-233ENST00000534636 SLC38A10Q9HBR0 1119 aa21.92■■□□□ 1.1
CTSB-233ENST00000534636 RAVER2Q9HCJ3 691 aaKnown RBP21.92■■□□□ 1.1
CTSB-233ENST00000534636 TSPY2A6NKD2 308 aa21.91■■□□□ 1.1
CTSB-233ENST00000534636 FDX1P10109 184 aa21.91■■□□□ 1.1
CTSB-233ENST00000534636 STAT2P52630 851 aa21.91■■□□□ 1.1
CTSB-233ENST00000534636 ANKRD35Q8N283 1001 aa21.91■■□□□ 1.1
CTSB-233ENST00000534636 FERMT2Q96AC1 680 aa21.91■■□□□ 1.1
CTSB-233ENST00000534636 MCM3APO60318 1980 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 SALL3Q9BXA9 1300 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 SNX17Q15036 470 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 TRIM60Q495X7 471 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 CCDC129Q6ZRS4 1044 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 DEFB123Q8N688 67 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 CHST13Q8NET6 341 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 ZHX1Q9UKY1 873 aaPredicted RBP21.9■■□□□ 1.1
CTSB-233ENST00000534636 STX8Q9UNK0 236 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 PHF24Q9UPV7 400 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 RIPK3Q9Y572 518 aa21.9■■□□□ 1.1
CTSB-233ENST00000534636 PGK1P00558 417 aa21.89■■□□□ 1.09
CTSB-233ENST00000534636 ZNF865P0CJ78 1059 aaPredicted RBP21.89■■□□□ 1.09
CTSB-233ENST00000534636 TAL1P17542 331 aaPredicted RBP21.89■■□□□ 1.09
CTSB-233ENST00000534636 SLC1A4P43007 532 aa21.89■■□□□ 1.09
CTSB-233ENST00000534636 HDAC1Q13547 482 aaPredicted RBP21.89■■□□□ 1.09
CTSB-233ENST00000534636 FAM160B2Q86V87 743 aa21.89■■□□□ 1.09
CTSB-233ENST00000534636 CHURC1Q8WUH1 139 aa21.89■■□□□ 1.09
CTSB-233ENST00000534636 FAM184BQ9ULE4 1060 aa21.89■■□□□ 1.09
CTSB-233ENST00000534636 TMEM232C9JQI7 657 aa21.88■■□□□ 1.09
CTSB-233ENST00000534636 C1orf53Q5VUE5 145 aa21.88■■□□□ 1.09
CTSB-233ENST00000534636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.88■■□□□ 1.09
CTSB-233ENST00000534636 ZNF467Q7Z7K2 595 aaPredicted RBP21.88■■□□□ 1.09
CTSB-233ENST00000534636 GMCL1Q96IK5 515 aa21.88■■□□□ 1.09
CTSB-233ENST00000534636 HELLSQ9NRZ9 838 aa21.88■■□□□ 1.09
CTSB-233ENST00000534636 HOMER2Q9NSB8 354 aa21.88■■□□□ 1.09
CTSB-233ENST00000534636 DNAJC25-GNG10A0A024R161 153 aa21.87■■□□□ 1.09
CTSB-233ENST00000534636 PDE1AP54750 535 aa21.87■■□□□ 1.09
CTSB-233ENST00000534636 CTDSPL2Q05D32 466 aa21.87■■□□□ 1.09
CTSB-233ENST00000534636 MAMDC4Q6UXC1 1216 aa21.87■■□□□ 1.09
CTSB-233ENST00000534636 ACAD9Q9H845 621 aa21.87■■□□□ 1.09
CTSB-233ENST00000534636 RANBP6O60518 1105 aaKnown RBP21.86■■□□□ 1.09
CTSB-233ENST00000534636 AAMPQ13685 434 aa21.86■■□□□ 1.09
CTSB-233ENST00000534636 STAG1Q8WVM7 1258 aa21.86■■□□□ 1.09
CTSB-233ENST00000534636 LENG1Q96BZ8 264 aaPredicted RBP21.86■■□□□ 1.09
CTSB-233ENST00000534636 PDLIM7Q9NR12 457 aa21.86■■□□□ 1.09
CTSB-233ENST00000534636 TOMM22Q9NS69 142 aa21.86■■□□□ 1.09
CTSB-233ENST00000534636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.86■■□□□ 1.096e-6■■□□□ 13.9
CTSB-233ENST00000534636 SYNRGQ9UMZ2 1314 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 A0A1W2PQ45 241 aaPredicted RBP21.85■■□□□ 1.09
CTSB-233ENST00000534636 A0A1W2PQY0 241 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 MCCP23508 829 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 TICAM2Q86XR7 235 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 NUP133Q8WUM0 1156 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 TSEN34Q9BSV6 310 aaKnown RBP21.85■■□□□ 1.09
CTSB-233ENST00000534636 ABHD16BQ9H3Z7 469 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 SPC25Q9HBM1 224 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.85■■□□□ 1.09
CTSB-233ENST00000534636 ANAPC4Q9UJX5 808 aa21.85■■□□□ 1.09
CTSB-233ENST00000534636 FOXP2O15409 715 aa21.84■■□□□ 1.09
CTSB-233ENST00000534636 ADAMTS4O75173 837 aa21.84■■□□□ 1.09
CTSB-233ENST00000534636 SNAI1O95863 264 aaPredicted RBP21.84■■□□□ 1.09
CTSB-233ENST00000534636 ACVR2BQ13705 512 aa21.84■■□□□ 1.09
CTSB-233ENST00000534636 TKFCQ3LXA3 575 aa21.84■■□□□ 1.09
CTSB-233ENST00000534636 MCMDC2Q4G0Z9 681 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms