RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-231ENST00000534382 RIOX2Q8IUF8 465 aa17.08■□□□□ 0.32
CTSB-231ENST00000534382 DCAF4Q8WV16 495 aa17.08■□□□□ 0.32
CTSB-231ENST00000534382 ZSCAN10Q96SZ4 725 aaPredicted RBP17.08■□□□□ 0.32
CTSB-231ENST00000534382 LSG1Q9H089 658 aaKnown RBP17.08■□□□□ 0.32
CTSB-231ENST00000534382 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.32
CTSB-231ENST00000534382 PARP14Q460N5 1801 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 ATP2A1O14983 1001 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 CDC45O75419 566 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 HMGCRP04035 888 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 FDX1P10109 184 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 CCL5P13501 91 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 IKQ13123 557 aaPredicted RBP17.07■□□□□ 0.32
CTSB-231ENST00000534382 TRMT44Q8IYL2 757 aaKnown RBP17.07■□□□□ 0.32
CTSB-231ENST00000534382 ANKS1AQ92625 1134 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 APBA2Q99767 749 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
CTSB-231ENST00000534382 KIAA0100Q14667 2235 aaKnown RBP17.06■□□□□ 0.32
CTSB-231ENST00000534382 E7EWF7 191 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 COPB2P35606 906 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 CCDC96Q2M329 555 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 RASGRP2Q7LDG7 609 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 ABRAQ8N0Z2 381 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 TRIB2Q92519 343 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 UBAC1Q9BSL1 405 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 TEX13BQ9BXU2 312 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 RNF208Q9H0X6 261 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 ANO2Q9NQ90 1003 aa17.06■□□□□ 0.32
CTSB-231ENST00000534382 TNKSO95271 1327 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 HOXC6P09630 235 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 PDHBP11177 359 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 FCER1AP12319 257 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
CTSB-231ENST00000534382 ADORA2AP29274 412 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 CCL14Q16627 93 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 SNRNP48Q6IEG0 339 aaKnown RBP17.05■□□□□ 0.32
CTSB-231ENST00000534382 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 ENAHQ8N8S7 591 aaPredicted RBP17.05■□□□□ 0.32
CTSB-231ENST00000534382 UNC93B1Q9H1C4 597 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 KAT14Q9H8E8 782 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 RAVER2Q9HCJ3 691 aaKnown RBP17.05■□□□□ 0.32
CTSB-231ENST00000534382 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
CTSB-231ENST00000534382 GJB1P08034 283 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 SNHG28P0DPA3 235 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 EN2P19622 333 aaPredicted RBP17.04■□□□□ 0.32
CTSB-231ENST00000534382 OAZ1P54368 228 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 BTNL9Q6UXG8 535 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
CTSB-231ENST00000534382 DPP9Q86TI2 863 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 PNMA1Q8ND90 353 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 NPLOC4Q8TAT6 608 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 PRR12Q9ULL5 1215 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 RIPK3Q9Y572 518 aa17.04■□□□□ 0.32
CTSB-231ENST00000534382 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
CTSB-231ENST00000534382 FRMPD2Q68DX3 1309 aaPredicted RBP17.03■□□□□ 0.32
CTSB-231ENST00000534382 COBLO75128 1261 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 SLC4A3P48751 1232 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 MLLT1Q03111 559 aaPredicted RBP17.03■□□□□ 0.32
CTSB-231ENST00000534382 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 TRIM32Q13049 653 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 NECTIN1Q15223 517 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 SEC23AQ15436 765 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 TTBK2Q6IQ55 1244 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 MMP19Q99542 508 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 GPCPD1Q9NPB8 672 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 SLC5A4Q9NY91 659 aa17.03■□□□□ 0.32
CTSB-231ENST00000534382 RPTORQ8N122 1335 aa17.02■□□□□ 0.32
CTSB-231ENST00000534382 SLC27A2O14975 620 aa17.02■□□□□ 0.32
CTSB-231ENST00000534382 SLC16A2P36021 539 aa17.02■□□□□ 0.32
CTSB-231ENST00000534382 KCTD2Q14681 263 aa17.02■□□□□ 0.32
CTSB-231ENST00000534382 GPATCH4Q5T3I0 446 aaKnown RBP17.02■□□□□ 0.32
CTSB-231ENST00000534382 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
CTSB-231ENST00000534382 MAP3K21Q5TCX8 1036 aa17.02■□□□□ 0.32
CTSB-231ENST00000534382 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.32
CTSB-231ENST00000534382 HMX1Q9NP08 348 aaPredicted RBP17.02■□□□□ 0.32
CTSB-231ENST00000534382 FLRT1Q9NZU1 646 aa17.02■□□□□ 0.32
CTSB-231ENST00000534382 ZNF536O15090 1300 aa17.01■□□□□ 0.31
CTSB-231ENST00000534382 IFIT3O14879 490 aaKnown RBP17.01■□□□□ 0.31
CTSB-231ENST00000534382 PRKAR2AP13861 404 aaKnown RBP17.01■□□□□ 0.31
CTSB-231ENST00000534382 GJA8P48165 433 aa17.01■□□□□ 0.31
CTSB-231ENST00000534382 SNAP25P60880 206 aa17.01■□□□□ 0.31
CTSB-231ENST00000534382 CACNB2Q08289 660 aaPredicted RBP17.01■□□□□ 0.31
CTSB-231ENST00000534382 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
CTSB-231ENST00000534382 MFSD14CQ5VZR4 134 aa17.01■□□□□ 0.31
CTSB-231ENST00000534382 CHST13Q8NET6 341 aa17.01■□□□□ 0.31
CTSB-231ENST00000534382 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.01■□□□□ 0.311e-7■■■□□ 17.4
CTSB-231ENST00000534382 PAK6Q9NQU5 681 aaPredicted RBP17.01■□□□□ 0.31
CTSB-231ENST00000534382 FBXO40Q9UH90 709 aa17.01■□□□□ 0.31
CTSB-231ENST00000534382 ERICH2A1L162 156 aa17■□□□□ 0.31
CTSB-231ENST00000534382 IGHA2P01877 340 aa17■□□□□ 0.31
CTSB-231ENST00000534382 SART3Q15020 963 aaKnown RBP17■□□□□ 0.31
CTSB-231ENST00000534382 RNF20Q5VTR2 975 aa17■□□□□ 0.31
CTSB-231ENST00000534382 OLFML2BQ68BL8 750 aa17■□□□□ 0.31
CTSB-231ENST00000534382 CCDC174Q6PII3 467 aa17■□□□□ 0.31
CTSB-231ENST00000534382 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
CTSB-231ENST00000534382 U2AF1L4Q8WU68 220 aaKnown RBP17■□□□□ 0.31
CTSB-231ENST00000534382 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms