RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 BMP3P12645 472 aa27.59■■■□□ 2.01
YIF1A-213ENST00000534374 FXR1P51114 621 aaKnown RBP eCLIP27.59■■■□□ 2.01
YIF1A-213ENST00000534374 KCTD2Q14681 263 aa27.59■■■□□ 2.01
YIF1A-213ENST00000534374 IL17RBQ9NRM6 502 aa27.59■■■□□ 2.01
YIF1A-213ENST00000534374 CCDC171Q6TFL3 1326 aa27.59■■■□□ 2.01
YIF1A-213ENST00000534374 CYBAP13498 195 aa27.58■■■□□ 2.01
YIF1A-213ENST00000534374 NOVP48745 357 aa27.58■■■□□ 2.01
YIF1A-213ENST00000534374 ZNF589Q86UQ0 364 aaPredicted RBP27.58■■■□□ 2.01
YIF1A-213ENST00000534374 TRPV1Q8NER1 839 aa27.58■■■□□ 2.01
YIF1A-213ENST00000534374 GMCL1Q96IK5 515 aa27.58■■■□□ 2.01
YIF1A-213ENST00000534374 MAML3Q96JK9 1138 aa27.58■■■□□ 2.01
YIF1A-213ENST00000534374 SLC38A10Q9HBR0 1119 aa27.58■■■□□ 2.01
YIF1A-213ENST00000534374 TACC3Q9Y6A5 838 aa27.58■■■□□ 2.01
YIF1A-213ENST00000534374 RANBP6O60518 1105 aaKnown RBP27.57■■■□□ 2
YIF1A-213ENST00000534374 CNGA1P29973 690 aa27.57■■■□□ 2
YIF1A-213ENST00000534374 KIFC2Q96AC6 838 aa27.57■■■□□ 2
YIF1A-213ENST00000534374 STX8Q9UNK0 236 aa27.57■■■□□ 2
YIF1A-213ENST00000534374 CTDP1Q9Y5B0 961 aaPredicted RBP27.57■■■□□ 2
YIF1A-213ENST00000534374 TRIOBPQ9H2D6 2365 aa27.57■■■□□ 2
YIF1A-213ENST00000534374 HIP1O00291 1037 aa27.56■■■□□ 2
YIF1A-213ENST00000534374 COL6A1P12109 1028 aa27.56■■■□□ 2
YIF1A-213ENST00000534374 OAZ1P54368 228 aa27.56■■■□□ 2
YIF1A-213ENST00000534374 SNRNP48Q6IEG0 339 aaKnown RBP27.56■■■□□ 2
YIF1A-213ENST00000534374 CHURC1Q8WUH1 139 aa27.56■■■□□ 2
YIF1A-213ENST00000534374 NRBP1Q9UHY1 535 aa27.56■■■□□ 2
YIF1A-213ENST00000534374 PLA2G6O60733 806 aa27.55■■■□□ 2
YIF1A-213ENST00000534374 PCP11498 1178 aaKnown RBP27.55■■■□□ 2
YIF1A-213ENST00000534374 SLC1A4P43007 532 aa27.55■■■□□ 2
YIF1A-213ENST00000534374 ZNF792Q3KQV3 632 aa27.55■■■□□ 2
YIF1A-213ENST00000534374 TCP11L1Q9NUJ3 509 aa27.55■■■□□ 2
YIF1A-213ENST00000534374 TMEM232C9JQI7 657 aa27.54■■■□□ 2
YIF1A-213ENST00000534374 SEPT4O43236 478 aa27.54■■■□□ 2
YIF1A-213ENST00000534374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.54■■■□□ 2
YIF1A-213ENST00000534374 FAM160B2Q86V87 743 aa27.54■■■□□ 2
YIF1A-213ENST00000534374 STAG1Q8WVM7 1258 aa27.54■■■□□ 2
YIF1A-213ENST00000534374 RIPK3Q9Y572 518 aa27.54■■■□□ 2
YIF1A-213ENST00000534374 RANBP2P49792 3224 aaKnown RBP27.53■■■□□ 2
YIF1A-213ENST00000534374 PFASO15067 1338 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 NMT2O60551 498 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 PGK2P07205 417 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 MCCP23508 829 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 STAT2P52630 851 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 RCSD1Q6JBY9 416 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 CHRDL2Q6WN34 429 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 CPXCR1Q8N123 301 aa27.53■■■□□ 2
YIF1A-213ENST00000534374 CWC27Q6UX04 472 aaKnown RBP27.52■■■□□ 2
YIF1A-213ENST00000534374 MSL3Q8N5Y2 521 aaKnown RBP27.52■■■□□ 2
YIF1A-213ENST00000534374 ARRDC4Q8NCT1 418 aa27.52■■■□□ 2
YIF1A-213ENST00000534374 TINF2Q9BSI4 451 aa27.52■■■□□ 2
YIF1A-213ENST00000534374 RAVER2Q9HCJ3 691 aaKnown RBP27.52■■■□□ 2
YIF1A-213ENST00000534374 TOMM22Q9NS69 142 aa27.52■■■□□ 2
YIF1A-213ENST00000534374 DIAPH3Q9NSV4 1193 aa27.52■■■□□ 2
YIF1A-213ENST00000534374 FBXO40Q9UH90 709 aa27.52■■■□□ 2
YIF1A-213ENST00000534374 PRAMEF19Q5SWL8 479 aa27.51■■□□□ 1.99
YIF1A-213ENST00000534374 AKNAD1Q5T1N1 836 aa27.51■■□□□ 1.99
YIF1A-213ENST00000534374 MFSD6Q6ZSS7 791 aa27.51■■□□□ 1.99
YIF1A-213ENST00000534374 CHST13Q8NET6 341 aa27.51■■□□□ 1.99
YIF1A-213ENST00000534374 DDX11Q96FC9 970 aa27.51■■□□□ 1.99
YIF1A-213ENST00000534374 SMCHD1A6NHR9 2005 aa27.51■■□□□ 1.99
YIF1A-213ENST00000534374 ALPK3Q96L96 1907 aa27.5■■□□□ 1.99
YIF1A-213ENST00000534374 DNAJC25-GNG10A0A024R161 153 aa27.5■■□□□ 1.99
YIF1A-213ENST00000534374 NT5C2P49902 561 aa27.5■■□□□ 1.99
YIF1A-213ENST00000534374 TTC14Q96N46 770 aa27.5■■□□□ 1.99
YIF1A-213ENST00000534374 PRO3102Q9H379 93 aa27.5■■□□□ 1.99
YIF1A-213ENST00000534374 RNF41Q9H4P4 317 aaPredicted RBP27.5■■□□□ 1.99
YIF1A-213ENST00000534374 DNM1LO00429 736 aa27.49■■□□□ 1.99
YIF1A-213ENST00000534374 HAND2P61296 217 aa27.49■■□□□ 1.99
YIF1A-213ENST00000534374 RRP12Q5JTH9 1297 aaKnown RBP27.49■■□□□ 1.99
YIF1A-213ENST00000534374 ZNF213O14771 459 aa27.48■■□□□ 1.99
YIF1A-213ENST00000534374 TOP1P11387 765 aaKnown RBP27.48■■□□□ 1.99
YIF1A-213ENST00000534374 DCAF4Q8WV16 495 aa27.48■■□□□ 1.99
YIF1A-213ENST00000534374 RBM27Q9P2N5 1060 aaKnown RBP27.48■■□□□ 1.99
YIF1A-213ENST00000534374 ISY1Q9ULR0 285 aaKnown RBP27.48■■□□□ 1.99
YIF1A-213ENST00000534374 PLXNA1Q9UIW2 1896 aa27.47■■□□□ 1.99
YIF1A-213ENST00000534374 PDE4AP27815 886 aa27.47■■□□□ 1.99
YIF1A-213ENST00000534374 SLC4A3P48751 1232 aa27.47■■□□□ 1.99
YIF1A-213ENST00000534374 IKQ13123 557 aaPredicted RBP27.47■■□□□ 1.99
YIF1A-213ENST00000534374 MAMDC4Q6UXC1 1216 aa27.47■■□□□ 1.99
YIF1A-213ENST00000534374 KCTD1Q719H9 257 aa27.47■■□□□ 1.99
YIF1A-213ENST00000534374 ZNF467Q7Z7K2 595 aaPredicted RBP27.47■■□□□ 1.99
YIF1A-213ENST00000534374 C7orf61Q8IZ16 206 aa27.47■■□□□ 1.99
YIF1A-213ENST00000534374 DSCC1Q9BVC3 393 aa27.47■■□□□ 1.99
YIF1A-213ENST00000534374 FRMPD3Q5JV73 1810 aa27.46■■□□□ 1.99
YIF1A-213ENST00000534374 TKFCQ3LXA3 575 aa27.46■■□□□ 1.99
YIF1A-213ENST00000534374 ANKRD35Q8N283 1001 aa27.46■■□□□ 1.99
YIF1A-213ENST00000534374 TMEM47Q9BQJ4 181 aa27.46■■□□□ 1.99
YIF1A-213ENST00000534374 SENP6Q9GZR1 1112 aaPredicted RBP27.46■■□□□ 1.99
YIF1A-213ENST00000534374 SYNGAP1Q96PV0 1343 aa27.45■■□□□ 1.99
YIF1A-213ENST00000534374 IRX6P78412 446 aaPredicted RBP27.45■■□□□ 1.98
YIF1A-213ENST00000534374 ESR2Q92731 530 aa27.45■■□□□ 1.98
YIF1A-213ENST00000534374 PRR12Q9ULL5 1215 aa27.45■■□□□ 1.98
YIF1A-213ENST00000534374 CNPY2Q9Y2B0 182 aa27.45■■□□□ 1.98
YIF1A-213ENST00000534374 ZNF536O15090 1300 aa27.44■■□□□ 1.98
YIF1A-213ENST00000534374 A0A1W2PPC1 479 aa27.44■■□□□ 1.98
YIF1A-213ENST00000534374 ZNF865P0CJ78 1059 aaPredicted RBP27.44■■□□□ 1.98
YIF1A-213ENST00000534374 LRRC26Q2I0M4 334 aa27.44■■□□□ 1.98
YIF1A-213ENST00000534374 TTC22Q5TAA0 569 aa27.44■■□□□ 1.98
YIF1A-213ENST00000534374 BTNL9Q6UXG8 535 aa27.44■■□□□ 1.98
YIF1A-213ENST00000534374 TBC1D10CQ8IV04 446 aa27.44■■□□□ 1.98
YIF1A-213ENST00000534374 CTNNA3Q9UI47 895 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms