RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TTC28Q96AY4 2481 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 RAD21O60216 631 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 SLC25A27O95847 323 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 SDSP20132 328 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 NOVP48745 357 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 OLFML2BQ68BL8 750 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
SF3B2-215ENST00000534307 NCAPG2Q86XI2 1143 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 RIOX2Q8IUF8 465 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 PAWRQ96IZ0 340 aaKnown RBP16.69■□□□□ 0.26
SF3B2-215ENST00000534307 SLF1Q9BQI6 1058 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 COL25A1Q9BXS0 654 aaPredicted RBP16.69■□□□□ 0.26
SF3B2-215ENST00000534307 IL17RBQ9NRM6 502 aa16.69■□□□□ 0.26
SF3B2-215ENST00000534307 ZNFX1Q9P2E3 1918 aaKnown RBP16.68■□□□□ 0.26
SF3B2-215ENST00000534307 ORC4O43929 436 aa16.68■□□□□ 0.26
SF3B2-215ENST00000534307 STAT3P40763 770 aa16.68■□□□□ 0.26
SF3B2-215ENST00000534307 MFSD14CQ5VZR4 134 aa16.68■□□□□ 0.26
SF3B2-215ENST00000534307 PRPF38AQ8NAV1 312 aaKnown RBP16.68■□□□□ 0.26
SF3B2-215ENST00000534307 TRPV1Q8NER1 839 aa16.68■□□□□ 0.26
SF3B2-215ENST00000534307 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
SF3B2-215ENST00000534307 ATP2A1O14983 1001 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 PDE4AP27815 886 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 CYP2C19P33261 490 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 LRIT3Q3SXY7 679 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 NECAB2Q7Z6G3 386 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 DPP9Q86TI2 863 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 C7orf61Q8IZ16 206 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 GMCL1Q96IK5 515 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
SF3B2-215ENST00000534307 ZMYND8Q9ULU4 1186 aaPredicted RBP16.67■□□□□ 0.26
SF3B2-215ENST00000534307 LAMA4Q16363 1823 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 NMT2O60551 498 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 FCER1AP12319 257 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 CYBAP13498 195 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 COPB2P35606 906 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
SF3B2-215ENST00000534307 SLFN13Q68D06 897 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 TEX13BQ9BXU2 312 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 PLXNA1Q9UIW2 1896 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 FEM1BQ9UK73 627 aa16.66■□□□□ 0.26
SF3B2-215ENST00000534307 COL6A1P12109 1028 aa16.65■□□□□ 0.26
SF3B2-215ENST00000534307 BMP3P12645 472 aa16.65■□□□□ 0.26
SF3B2-215ENST00000534307 PPP4R3BQ5MIZ7 849 aa16.65■□□□□ 0.26
SF3B2-215ENST00000534307 MAML3Q96JK9 1138 aa16.65■□□□□ 0.26
SF3B2-215ENST00000534307 DDX20Q9UHI6 824 aaKnown RBP16.65■□□□□ 0.26
SF3B2-215ENST00000534307 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
SF3B2-215ENST00000534307 PFASO15067 1338 aa16.65■□□□□ 0.26
SF3B2-215ENST00000534307 MAGEA10P43363 369 aaPredicted RBP16.64■□□□□ 0.25
SF3B2-215ENST00000534307 MFAP1P55081 439 aaKnown RBP16.64■□□□□ 0.25
SF3B2-215ENST00000534307 SNRNP48Q6IEG0 339 aaKnown RBP16.64■□□□□ 0.25
SF3B2-215ENST00000534307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.64■□□□□ 0.25
SF3B2-215ENST00000534307 TDHQ8IZJ6 230 aa16.64■□□□□ 0.25
SF3B2-215ENST00000534307 KIFC2Q96AC6 838 aa16.64■□□□□ 0.25
SF3B2-215ENST00000534307 MMP19Q99542 508 aa16.64■□□□□ 0.25
SF3B2-215ENST00000534307 SLC5A4Q9NY91 659 aa16.64■□□□□ 0.25
SF3B2-215ENST00000534307 STX8Q9UNK0 236 aa16.64■□□□□ 0.25
SF3B2-215ENST00000534307 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
SF3B2-215ENST00000534307 MSCO60682 206 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 PGK2P07205 417 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 GSPT1P15170 499 aaKnown RBP16.63■□□□□ 0.25
SF3B2-215ENST00000534307 OAZ1P54368 228 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 HAND2P61296 217 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 ZNF792Q3KQV3 632 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 CWC27Q6UX04 472 aaKnown RBP16.63■□□□□ 0.25
SF3B2-215ENST00000534307 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 TBC1D10CQ8IV04 446 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 STAG1Q8WVM7 1258 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 C11orf49Q9H6J7 331 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
SF3B2-215ENST00000534307 DIS3Q9Y2L1 958 aaKnown RBP16.63■□□□□ 0.25
SF3B2-215ENST00000534307 DNAJC25-GNG10A0A024R161 153 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 HIP1O00291 1037 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 PLA2G6O60733 806 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 ZBED4O75132 1171 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
SF3B2-215ENST00000534307 SYN1P17600 705 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 MCCP23508 829 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 SLC1A4P43007 532 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 STAT2P52630 851 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 KCTD2Q14681 263 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 AKNAD1Q5T1N1 836 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.62■□□□□ 0.25
SF3B2-215ENST00000534307 IL25Q9H293 177 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 DIAPH3Q9NSV4 1193 aa16.62■□□□□ 0.25
SF3B2-215ENST00000534307 SEPT4O43236 478 aa16.61■□□□□ 0.25
SF3B2-215ENST00000534307 FDX1P10109 184 aa16.61■□□□□ 0.25
SF3B2-215ENST00000534307 TTC22Q5TAA0 569 aa16.61■□□□□ 0.25
SF3B2-215ENST00000534307 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
SF3B2-215ENST00000534307 FAM160B2Q86V87 743 aa16.61■□□□□ 0.25
SF3B2-215ENST00000534307 CPXCR1Q8N123 301 aa16.61■□□□□ 0.25
SF3B2-215ENST00000534307 RAVER2Q9HCJ3 691 aaKnown RBP16.61■□□□□ 0.25
SF3B2-215ENST00000534307 ZNF536O15090 1300 aa16.61■□□□□ 0.25
SF3B2-215ENST00000534307 CNGA1P29973 690 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
SF3B2-215ENST00000534307 PRAMEF19Q5SWL8 479 aa16.6■□□□□ 0.25
SF3B2-215ENST00000534307 KCTD1Q719H9 257 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms