RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	LRRC47	Q8N1G4	583 aa	Known RBP	28.88	■■■□□ 2.21
RELA-223	ENST00000534283	FEM1B	Q9UK73	627 aa		28.88	■■■□□ 2.21
RELA-223	ENST00000534283	MDM2	Q00987	491 aa	Predicted RBP	28.87	■■■□□ 2.21
RELA-223	ENST00000534283	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	28.87	■■■□□ 2.21
RELA-223	ENST00000534283	PARP14	Q460N5	1801 aa		28.87	■■■□□ 2.21
RELA-223	ENST00000534283	KBTBD13	C9JR72	458 aa		28.86	■■■□□ 2.21
RELA-223	ENST00000534283	ZBED4	O75132	1171 aa		28.86	■■■□□ 2.21
RELA-223	ENST00000534283	SLFN13	Q68D06	897 aa		28.86	■■■□□ 2.21
RELA-223	ENST00000534283	GPR153	Q6NV75	609 aa		28.86	■■■□□ 2.21
RELA-223	ENST00000534283	KIFC2	Q96AC6	838 aa		28.86	■■■□□ 2.21
RELA-223	ENST00000534283	TACC3	Q9Y6A5	838 aa		28.86	■■■□□ 2.21
RELA-223	ENST00000534283	MYH8	P13535	1937 aa		28.86	■■■□□ 2.21
RELA-223	ENST00000534283	SLC3A2	P08195	630 aa	Known RBP	28.85	■■■□□ 2.21
RELA-223	ENST00000534283	TSPY3	P0CV98	308 aa		28.85	■■■□□ 2.21
RELA-223	ENST00000534283	TSPY8	P0CW00	308 aa		28.85	■■■□□ 2.21
RELA-223	ENST00000534283	ADCYAP1R1	P41586	468 aa		28.85	■■■□□ 2.21
RELA-223	ENST00000534283	PDE1A	P54750	535 aa		28.85	■■■□□ 2.21
RELA-223	ENST00000534283	MSL3	Q8N5Y2	521 aa	Known RBP	28.85	■■■□□ 2.21
RELA-223	ENST00000534283	EVI5L	Q96CN4	794 aa		28.85	■■■□□ 2.21
RELA-223	ENST00000534283	RAVER2	Q9HCJ3	691 aa	Known RBP	28.85	■■■□□ 2.21
RELA-223	ENST00000534283	INCENP	Q9NQS7	918 aa		28.85	■■■□□ 2.21
RELA-223	ENST00000534283	BMP3	P12645	472 aa		28.84	■■■□□ 2.21
RELA-223	ENST00000534283	VPS53	Q5VIR6	699 aa		28.84	■■■□□ 2.21
RELA-223	ENST00000534283	C1orf53	Q5VUE5	145 aa		28.84	■■■□□ 2.21
RELA-223	ENST00000534283	MAMDC4	Q6UXC1	1216 aa		28.84	■■■□□ 2.21
RELA-223	ENST00000534283	CPXCR1	Q8N123	301 aa		28.84	■■■□□ 2.21
RELA-223	ENST00000534283	XPNPEP3	Q9NQH7	507 aa		28.84	■■■□□ 2.21
RELA-223	ENST00000534283	PHF24	Q9UPV7	400 aa		28.84	■■■□□ 2.21
RELA-223	ENST00000534283	SNAI1	O95863	264 aa	Predicted RBP	28.83	■■■□□ 2.21
RELA-223	ENST00000534283	RARB	P10826	455 aa		28.83	■■■□□ 2.21
RELA-223	ENST00000534283	OAZ1	P54368	228 aa		28.83	■■■□□ 2.21
RELA-223	ENST00000534283	GMCL1	Q96IK5	515 aa		28.83	■■■□□ 2.21
RELA-223	ENST00000534283	IL17RB	Q9NRM6	502 aa		28.83	■■■□□ 2.21
RELA-223	ENST00000534283	ANAPC4	Q9UJX5	808 aa		28.83	■■■□□ 2.21
RELA-223	ENST00000534283	ATP11B	Q9Y2G3	1177 aa		28.83	■■■□□ 2.21
RELA-223	ENST00000534283	FRMPD3	Q5JV73	1810 aa		28.83	■■■□□ 2.21
RELA-223	ENST00000534283	MYCN	P04198	464 aa	Predicted RBP	28.82	■■■□□ 2.2
RELA-223	ENST00000534283	DDX11	Q96FC9	970 aa		28.82	■■■□□ 2.2
RELA-223	ENST00000534283	FGD4	Q96M96	766 aa		28.82	■■■□□ 2.2
RELA-223	ENST00000534283	DNAH12	Q6ZR08	3092 aa		28.82	■■■□□ 2.2
RELA-223	ENST00000534283	SYNGAP1	Q96PV0	1343 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	PGK1	P00558	417 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	NOV	P48745	357 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	CTDSPL2	Q05D32	466 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	ALX1	Q15699	326 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	TRIM60	Q495X7	471 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	ZNF467	Q7Z7K2	595 aa	Predicted RBP	28.81	■■■□□ 2.2
RELA-223	ENST00000534283	FERMT2	Q96AC1	680 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	HELLS	Q9NRZ9	838 aa		28.81	■■■□□ 2.2
RELA-223	ENST00000534283	FGR	P09769	529 aa		28.8	■■■□□ 2.2
RELA-223	ENST00000534283	CHST13	Q8NET6	341 aa		28.8	■■■□□ 2.2
RELA-223	ENST00000534283	LBHD1	Q9BQE6	289 aa	Predicted RBP	28.8	■■■□□ 2.2
RELA-223	ENST00000534283	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.8	■■■□□ 2.2
RELA-223	ENST00000534283	CNPY2	Q9Y2B0	182 aa		28.8	■■■□□ 2.2
RELA-223	ENST00000534283	TMEM232	C9JQI7	657 aa		28.79	■■■□□ 2.2
RELA-223	ENST00000534283	ADAMTS4	O75173	837 aa		28.79	■■■□□ 2.2
RELA-223	ENST00000534283	FDX1	P10109	184 aa		28.79	■■■□□ 2.2
RELA-223	ENST00000534283	AKR1A1	P14550	325 aa		28.79	■■■□□ 2.2
RELA-223	ENST00000534283	SLC4A3	P48751	1232 aa		28.79	■■■□□ 2.2
RELA-223	ENST00000534283	TICAM2	Q86XR7	235 aa		28.79	■■■□□ 2.2
RELA-223	ENST00000534283	STAG1	Q8WVM7	1258 aa		28.79	■■■□□ 2.2
RELA-223	ENST00000534283	LENG1	Q96BZ8	264 aa	Predicted RBP	28.79	■■■□□ 2.2
RELA-223	ENST00000534283	ZNF536	O15090	1300 aa		28.78	■■■□□ 2.2
RELA-223	ENST00000534283	NMT2	O60551	498 aa		28.78	■■■□□ 2.2
RELA-223	ENST00000534283	PLA2G6	O60733	806 aa		28.78	■■■□□ 2.2
RELA-223	ENST00000534283	MCC	P23508	829 aa		28.78	■■■□□ 2.2
RELA-223	ENST00000534283	RNF180	Q86T96	592 aa		28.78	■■■□□ 2.2
RELA-223	ENST00000534283	FAM227B	Q96M60	508 aa		28.78	■■■□□ 2.2
RELA-223	ENST00000534283	FBXO40	Q9UH90	709 aa		28.78	■■■□□ 2.2
RELA-223	ENST00000534283	CTDP1	Q9Y5B0	961 aa	Predicted RBP	28.78	■■■□□ 2.2
RELA-223	ENST00000534283	COL11A1	P12107	1806 aa	Predicted RBP	28.78	■■■□□ 2.2
RELA-223	ENST00000534283	ORC4	O43929	436 aa		28.77	■■■□□ 2.2
RELA-223	ENST00000534283	PPP4R3B	Q5MIZ7	849 aa		28.77	■■■□□ 2.2
RELA-223	ENST00000534283	FAM160B2	Q86V87	743 aa		28.77	■■■□□ 2.2
RELA-223	ENST00000534283	PRKAG2	Q9UGJ0	569 aa		28.77	■■■□□ 2.2
RELA-223	ENST00000534283	FAM184B	Q9ULE4	1060 aa		28.77	■■■□□ 2.2
RELA-223	ENST00000534283	TRIM43B	A6NCK2	446 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	TSPY2	A6NKD2	308 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	SLC1A4	P43007	532 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	STAT2	P52630	851 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	TLE2	Q04725	743 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	CCSAP	Q6IQ19	270 aa	Predicted RBP	28.76	■■■□□ 2.19
RELA-223	ENST00000534283	SH3RF1	Q7Z6J0	888 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	ANKRD35	Q8N283	1001 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	KLHDC9	Q8NEP7	349 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	CHURC1	Q8WUH1	139 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283	TRIM43	Q96BQ3	446 aa	Predicted RBP	28.76	■■■□□ 2.19
RELA-223	ENST00000534283	PDLIM7	Q9NR12	457 aa		28.76	■■■□□ 2.19
RELA-223	ENST00000534283		A0A0D9SFI3	127 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	FGA	P02671	866 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	AAMP	Q13685	434 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	MCMDC2	Q4G0Z9	681 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	RCSD1	Q6JBY9	416 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283		Q7L0L9	218 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	SMC5	Q8IY18	1101 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	DEFB123	Q8N688	67 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	AGBL1	Q96MI9	1066 aa		28.75	■■■□□ 2.19
RELA-223	ENST00000534283	TSEN34	Q9BSV6	310 aa	Known RBP	28.75	■■■□□ 2.19
RELA-223	ENST00000534283	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	28.75	■■■□□ 2.19
RELA-223	ENST00000534283	STX8	Q9UNK0	236 aa		28.75	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms