RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.95■□□□□ 0.46
CTSB-230ENST00000534149 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.95■□□□□ 0.46
CTSB-230ENST00000534149 MYADML2A6NDP7 307 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 SNAI1O95863 264 aaPredicted RBP17.95■□□□□ 0.46
CTSB-230ENST00000534149 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
CTSB-230ENST00000534149 KCNA10Q16322 511 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 SNRNP48Q6IEG0 339 aaKnown RBP17.95■□□□□ 0.46
CTSB-230ENST00000534149 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 NUP133Q8WUM0 1156 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 SYMPKQ92797 1274 aaKnown RBP17.95■□□□□ 0.46
CTSB-230ENST00000534149 SLF1Q9BQI6 1058 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
CTSB-230ENST00000534149 FAM184BQ9ULE4 1060 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 SYNGAP1Q96PV0 1343 aa17.95■□□□□ 0.46
CTSB-230ENST00000534149 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 IRX5P78411 483 aaPredicted RBP17.94■□□□□ 0.46
CTSB-230ENST00000534149 CCSAPQ6IQ19 270 aaPredicted RBP17.94■□□□□ 0.46
CTSB-230ENST00000534149 SIRT2Q8IXJ6 389 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 TIFAQ96CG3 184 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 DDX11Q96FC9 970 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 HAUS7Q99871 368 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.461e-7■■■■■ 39.9
CTSB-230ENST00000534149 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 ZNF576Q9H609 170 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 TBX21Q9UL17 535 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 RIPK3Q9Y572 518 aa17.94■□□□□ 0.46
CTSB-230ENST00000534149 HMMRO75330 724 aa17.93■□□□□ 0.46
CTSB-230ENST00000534149 TIMP1P01033 207 aa17.93■□□□□ 0.46
CTSB-230ENST00000534149 ATP5JP18859 108 aa17.93■□□□□ 0.46
CTSB-230ENST00000534149 SLC4A3P48751 1232 aa17.93■□□□□ 0.46
CTSB-230ENST00000534149 UBE3CQ15386 1083 aa17.93■□□□□ 0.46
CTSB-230ENST00000534149 STK11IPQ8N1F8 1099 aa17.93■□□□□ 0.46
CTSB-230ENST00000534149 MSL3Q8N5Y2 521 aaKnown RBP17.93■□□□□ 0.46
CTSB-230ENST00000534149 PUS7LQ9H0K6 701 aaKnown RBP17.93■□□□□ 0.46
CTSB-230ENST00000534149 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
CTSB-230ENST00000534149 ADCY6O43306 1168 aa17.92■□□□□ 0.46
CTSB-230ENST00000534149 DUSP11O75319 330 aaKnown RBP17.92■□□□□ 0.46
CTSB-230ENST00000534149 MAMDC4Q6UXC1 1216 aa17.92■□□□□ 0.46
CTSB-230ENST00000534149 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
CTSB-230ENST00000534149 CPXCR1Q8N123 301 aa17.92■□□□□ 0.46
CTSB-230ENST00000534149 GLT1D1Q96MS3 346 aa17.92■□□□□ 0.46
CTSB-230ENST00000534149 ARPP21Q9UBL0 812 aaPredicted RBP17.92■□□□□ 0.46
CTSB-230ENST00000534149 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
CTSB-230ENST00000534149 RAB11FIP3O75154 756 aa17.91■□□□□ 0.46
CTSB-230ENST00000534149 NDUFB10O96000 172 aa17.91■□□□□ 0.46
CTSB-230ENST00000534149 C6orf222P0C671 652 aaPredicted RBP17.91■□□□□ 0.46
CTSB-230ENST00000534149 RASA1P20936 1047 aa17.91■□□□□ 0.46
CTSB-230ENST00000534149 CST5P28325 142 aaPredicted RBP17.91■□□□□ 0.46
CTSB-230ENST00000534149 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
CTSB-230ENST00000534149 MFSD5Q6N075 450 aa17.91■□□□□ 0.46
CTSB-230ENST00000534149 MROH7Q68CQ1 1323 aa17.91■□□□□ 0.46
CTSB-230ENST00000534149 GRXCR1A8MXD5 290 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 F5H6K3 240 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 ASGR1P07306 291 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 PBX2P40425 430 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 KLRC3Q07444 240 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 PPIGQ13427 754 aaKnown RBP eCLIP17.9■□□□□ 0.462e-12■□□□□ 8.5
CTSB-230ENST00000534149 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 TMEM240Q5SV17 173 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 CCDC129Q6ZRS4 1044 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 C16orf59Q7L2K0 433 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 VTI1AQ96AJ9 217 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 PBX4Q9BYU1 374 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 RAVER2Q9HCJ3 691 aaKnown RBP17.9■□□□□ 0.46
CTSB-230ENST00000534149 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.9■□□□□ 0.46
CTSB-230ENST00000534149 NYAP2Q9P242 653 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 ELP1O95163 1332 aa17.9■□□□□ 0.46
CTSB-230ENST00000534149 ZBED4O75132 1171 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 ACRP10323 421 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 CSF2RAP15509 400 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 CDK7P50613 346 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 CCDC144BQ3MJ40 725 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 ZSCAN25Q6NSZ9 544 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 ZNF467Q7Z7K2 595 aaPredicted RBP17.89■□□□□ 0.45
CTSB-230ENST00000534149 PRPF38AQ8NAV1 312 aaKnown RBP17.89■□□□□ 0.45
CTSB-230ENST00000534149 PCSK9Q8NBP7 692 aaKnown RBP17.89■□□□□ 0.45
CTSB-230ENST00000534149 PPM1EQ8WY54 764 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 FGD4Q96M96 766 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 PPP1R12CQ9BZL4 782 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 MKNK2Q9HBH9 465 aa17.89■□□□□ 0.45
CTSB-230ENST00000534149 CTDP1Q9Y5B0 961 aaPredicted RBP17.89■□□□□ 0.45
CTSB-230ENST00000534149 A0A0U1RQG5 324 aaPredicted RBP17.88■□□□□ 0.45
CTSB-230ENST00000534149 ARVCFO00192 962 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 ATP2A1O14983 1001 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 CCDC174Q6PII3 467 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 ANKRD35Q8N283 1001 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 KIFC2Q96AC6 838 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 STRBPQ96SI9 672 aaKnown RBP17.88■□□□□ 0.45
CTSB-230ENST00000534149 GAS2L1Q99501 681 aaPredicted RBP17.88■□□□□ 0.45
CTSB-230ENST00000534149 UPF3AQ9H1J1 476 aaKnown RBP17.88■□□□□ 0.45
CTSB-230ENST00000534149 ABHD16BQ9H3Z7 469 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 PRDM12Q9H4Q4 367 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 SPC25Q9HBM1 224 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 CLIP2Q9UDT6 1046 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 COG6Q9Y2V7 657 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 CHD9Q3L8U1 2897 aa17.88■□□□□ 0.45
CTSB-230ENST00000534149 MINDY4BA8MYZ0 360 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms