RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, human

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-208	ENST00000534106	TAOK3	Q9H2K8	898 aa		4.15	□□□□□ -1.75
CHMP4A-208	ENST00000534106	CHRD	Q9H2X0	955 aa		4.15	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SOX17	Q9H6I2	414 aa	Predicted RBP	4.15	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PRKAG2	Q9UGJ0	569 aa		4.15	□□□□□ -1.75
CHMP4A-208	ENST00000534106	NARF	Q9UHQ1	456 aa		4.15	□□□□□ -1.75
CHMP4A-208	ENST00000534106	QRICH2	Q9H0J4	1663 aa		4.15	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SZT2	Q5T011	3432 aa		4.15	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ROCK2	O75116	1388 aa	Known RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	INSR	P06213	1382 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	MKI67	P46013	3256 aa	Known RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	UBR3	Q6ZT12	1888 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	FAM208A	Q9UK61	1670 aa	Known RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	IQCA1L	A6NCM1	817 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	TNFRSF21	O75509	655 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PRNP	P04156	253 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	NFIC	P08651	508 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	CYP19A1	P11511	503 aa	Predicted RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	JUNB	P17275	347 aa	Predicted RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	CYP27A1	Q02318	531 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	EHHADH	Q08426	723 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	AKAP4	Q5JQC9	854 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	HABP4	Q5JVS0	413 aa	Known RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SYNE4	Q8N205	404 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SNX29	Q8TEQ0	813 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	CARD11	Q9BXL7	1154 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ZFYVE1	Q9HBF4	777 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	LGR6	Q9HBX8	967 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	AP4E1	Q9UPM8	1137 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ZBTB1	Q9Y2K1	713 aa		4.14	□□□□□ -1.75
CHMP4A-208	ENST00000534106	C4A	P0C0L4	1744 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	KIAA1210	Q9ULL0	1709 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	RGPD2	P0DJD1	1756 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ST20-MTHFS	A0A0A6YYL1	179 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	CELF2	O95319	508 aa	Known RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	DLGAP3	O95886	979 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	CYP11A1	P05108	521 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	C8A	P07357	584 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ADH5	P11766	374 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	MAP2K2	P36507	400 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ECE1	P42892	770 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	TNNT2	P45379	298 aa	Predicted RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	USP5	P45974	858 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	MTHFS	P49914	203 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	EIF4A2	Q14240	407 aa	Known RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	POU4F3	Q15319	338 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PRR5L	Q6MZQ0	368 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PRPF40B	Q6NWY9	871 aa	Known RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	AEBP1	Q8IUX7	1158 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ACTL7B	Q9Y614	415 aa		4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SOS1	Q07889	1333 aa	Predicted RBP	4.13	□□□□□ -1.75
CHMP4A-208	ENST00000534106	MAP2	P11137	1827 aa	Known RBP	4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	TAF1L	Q8IZX4	1826 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	KIF13B	Q9NQT8	1826 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106		A0A096LPE4	126 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106		A0A1W2PPZ6	126 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	METTL12	A8MUP2	240 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	FZD9	O00144	591 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	BIN1	O00499	593 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	POLR3D	P05423	398 aa	Predicted RBP	4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SRGN	P10124	158 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	MAOB	P27338	520 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PDE6B	P35913	854 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ASPA	P45381	313 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	JAG1	P78504	1218 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PCDH1	Q08174	1060 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	MTMR3	Q13615	1198 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PDE3A	Q14432	1141 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PLCL1	Q15111	1095 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ZNF765	Q7L2R6	523 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SAPCD2	Q86UD0	394 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PNMA8A	Q86V59	439 aa	Predicted RBP	4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	EZH1	Q92800	747 aa	Predicted RBP	4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	TESK2	Q96S53	571 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	CORO1B	Q9BR76	489 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	BRIP1	Q9BX63	1249 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	ZNF408	Q9H9D4	720 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	LATS2	Q9NRM7	1088 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	RNF186	Q9NXI6	227 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	POLK	Q9UBT6	870 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	MTMR7	Q9Y216	660 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SLC5A6	Q9Y289	635 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	DAGLA	Q9Y4D2	1042 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	LTBP3	Q9NS15	1303 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PKD1L3	Q7Z443	1732 aa		4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SMG6	Q86US8	1419 aa	Known RBP	4.12	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SBF1	O95248	1867 aa		4.11	□□□□□ -1.75
CHMP4A-208	ENST00000534106	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.11	□□□□□ -1.75
CHMP4A-208	ENST00000534106	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.11	□□□□□ -1.75
CHMP4A-208	ENST00000534106	SHTN1	A0MZ66	631 aa		4.11	□□□□□ -1.75
CHMP4A-208	ENST00000534106	TCERG1	O14776	1098 aa	Known RBP	4.11	□□□□□ -1.75
CHMP4A-208	ENST00000534106	FAM13A	O94988	1023 aa		4.11	□□□□□ -1.75
CHMP4A-208	ENST00000534106	PIP4K2A	P48426	406 aa	Predicted RBP	4.11	□□□□□ -1.75
CHMP4A-208	ENST00000534106	FXR1	P51114	621 aa	Known RBP eCLIP	4.11	□□□□□ -1.75

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