RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 SHHQ15465 462 aa20.14■□□□□ 0.81
CAPRIN1-216ENST00000534042 LRRFIP1Q32MZ4 808 aaKnown RBP20.14■□□□□ 0.81
CAPRIN1-216ENST00000534042 BADQ92934 168 aa20.14■□□□□ 0.81
CAPRIN1-216ENST00000534042 DDX11Q96FC9 970 aa20.14■□□□□ 0.81
CAPRIN1-216ENST00000534042 ZBED4O75132 1171 aa20.13■□□□□ 0.81
CAPRIN1-216ENST00000534042 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
CAPRIN1-216ENST00000534042 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
CAPRIN1-216ENST00000534042 CPXCR1Q8N123 301 aa20.13■□□□□ 0.81
CAPRIN1-216ENST00000534042 MSL3Q8N5Y2 521 aaKnown RBP20.13■□□□□ 0.81
CAPRIN1-216ENST00000534042 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
CAPRIN1-216ENST00000534042 RIPK3Q9Y572 518 aa20.13■□□□□ 0.81
CAPRIN1-216ENST00000534042 IGKV6D-41A0A0C4DH26 115 aa20.12■□□□□ 0.81
CAPRIN1-216ENST00000534042 TRIM43BA6NCK2 446 aa20.12■□□□□ 0.81
CAPRIN1-216ENST00000534042 M0R2C6 588 aa20.12■□□□□ 0.81
CAPRIN1-216ENST00000534042 PRDM1O75626 825 aa20.12■□□□□ 0.81
CAPRIN1-216ENST00000534042 ZNF697Q5TEC3 545 aa20.12■□□□□ 0.81
CAPRIN1-216ENST00000534042 TRIM43Q96BQ3 446 aaPredicted RBP20.12■□□□□ 0.81
CAPRIN1-216ENST00000534042 TACC3Q9Y6A5 838 aa20.12■□□□□ 0.81
CAPRIN1-216ENST00000534042 CUL9Q8IWT3 2517 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 PATL2C9JE40 543 aaKnown RBP20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 ATP2A1O14983 1001 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 C9orf50Q5SZB4 431 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 MKL1Q969V6 931 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 KIFC2Q96AC6 838 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 LENG1Q96BZ8 264 aaPredicted RBP20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 CEP95Q96GE4 821 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 FAM161BQ96MY7 647 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 NACAP1Q9BZK3 213 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 MTMR4Q9NYA4 1195 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 FAM184BQ9ULE4 1060 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 MCM3APO60318 1980 aa20.11■□□□□ 0.81
CAPRIN1-216ENST00000534042 SYNGAP1Q96PV0 1343 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 DNAJC25-GNG10A0A024R161 153 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 A0A1W2PQ45 241 aaPredicted RBP20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 A0A1W2PQY0 241 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 SNAI1O95863 264 aaPredicted RBP20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 TTLL1O95922 423 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 CLTBP09497 229 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 MAMDC4Q6UXC1 1216 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 GUCD1Q96NT3 240 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 TSEN34Q9BSV6 310 aaKnown RBP20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 RAVER2Q9HCJ3 691 aaKnown RBP20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 FEM1BQ9UK73 627 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 ZHX1Q9UKY1 873 aaPredicted RBP20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 SYNPO2Q9UMS6 1093 aa20.1■□□□□ 0.81
CAPRIN1-216ENST00000534042 TTC41PQ6P2S7 1318 aa20.09■□□□□ 0.81
CAPRIN1-216ENST00000534042 ERC2O15083 957 aa20.09■□□□□ 0.81
CAPRIN1-216ENST00000534042 ADAMTS4O75173 837 aa20.09■□□□□ 0.81
CAPRIN1-216ENST00000534042 PDE4BQ07343 736 aa20.09■□□□□ 0.81
CAPRIN1-216ENST00000534042 LRRC47Q8N1G4 583 aaKnown RBP20.09■□□□□ 0.81
CAPRIN1-216ENST00000534042 SLC38A10Q9HBR0 1119 aa20.09■□□□□ 0.81
CAPRIN1-216ENST00000534042 FBXO40Q9UH90 709 aa20.09■□□□□ 0.81
CAPRIN1-216ENST00000534042 PQBP1O60828 265 aaKnown RBP20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 SLC3A2P08195 630 aaKnown RBP20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 TSPY3P0CV98 308 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 TSPY8P0CW00 308 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 RAG1P15918 1043 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 ZNF467Q7Z7K2 595 aaPredicted RBP20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 ANKRD35Q8N283 1001 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 GMCL1P1Q8NEA9 526 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 NEDD1Q8NHV4 660 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 NUP133Q8WUM0 1156 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 STARD7Q9NQZ5 370 aa20.08■□□□□ 0.81
CAPRIN1-216ENST00000534042 SYNRGQ9UMZ2 1314 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 KIAA0355O15063 1070 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 ACLYP53396 1101 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 OAZ1P54368 228 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 SLFN13Q68D06 897 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 CHST13Q8NET6 341 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 FSD1Q9BTV5 496 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 NAPBQ9H115 298 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 TMEM39AQ9NV64 488 aa20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
CAPRIN1-216ENST00000534042 MOXD2PA6NHM9 499 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 DUSP11O75319 330 aaKnown RBP20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 FDX1P10109 184 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 BMP3P12645 472 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 ITGB8P26012 769 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 SMAD3P84022 425 aaKnown RBP20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 TFAP4Q01664 338 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 PPARAQ07869 468 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 ACVR2BQ13705 512 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 KCNA10Q16322 511 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 KLHDC9Q8NEP7 349 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 PI4K2BQ8TCG2 481 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 PLIN4Q96Q06 1357 aa20.06■□□□□ 0.8
CAPRIN1-216ENST00000534042 DCDC2CA8MYV0 355 aa20.05■□□□□ 0.8
CAPRIN1-216ENST00000534042 ZMYM1Q5SVZ6 1142 aa20.05■□□□□ 0.8
CAPRIN1-216ENST00000534042 TOX2Q96NM4 488 aa20.05■□□□□ 0.8
CAPRIN1-216ENST00000534042 SEMA6BQ9H3T3 888 aa20.05■□□□□ 0.8
CAPRIN1-216ENST00000534042 ABHD16BQ9H3Z7 469 aa20.05■□□□□ 0.8
CAPRIN1-216ENST00000534042 SPC25Q9HBM1 224 aa20.05■□□□□ 0.8
CAPRIN1-216ENST00000534042 A0A0C4DFX4 3053 aa20.05■□□□□ 0.8
CAPRIN1-216ENST00000534042 TMEM232C9JQI7 657 aa20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 ARMCX2Q7L311 632 aa20.04■□□□□ 0.8
CAPRIN1-216ENST00000534042 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms