RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 SLC28A3Q9HAS3 691 aa11.34□□□□□ -0.59
SOX9-AS1-213ENST00000533996 STARD7Q9NQZ5 370 aa11.34□□□□□ -0.59
SOX9-AS1-213ENST00000533996 SERPINB13Q9UIV8 391 aa11.34□□□□□ -0.59
SOX9-AS1-213ENST00000533996 TBX21Q9UL17 535 aa11.34□□□□□ -0.59
SOX9-AS1-213ENST00000533996 ELP1O95163 1332 aa11.34□□□□□ -0.59
SOX9-AS1-213ENST00000533996 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 REV3LO60673 3130 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 GRXCR1A8MXD5 290 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 GPR37O15354 613 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SLC25A27O95847 323 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 PGK1P00558 417 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 AKR1A1P14550 325 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CDK7P50613 346 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ACLYP53396 1101 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TMEM31Q5JXX7 168 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TTC6Q86TZ1 520 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ACER1Q8TDN7 264 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TINF2Q9BSI4 451 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
SOX9-AS1-213ENST00000533996 MYO5AQ9Y4I1 1855 aaKnown RBP11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ERC2O15083 957 aa11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ADAMTS4O75173 837 aa11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 POU3F3P20264 500 aaPredicted RBP11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 MTX1Q13505 466 aa11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 NCAPG2Q86XI2 1143 aa11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 MSL3Q8N5Y2 521 aaKnown RBP11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 KLHDC9Q8NEP7 349 aa11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SNPHO15079 494 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ZNF865P0CJ78 1059 aaPredicted RBP11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CSF2RAP15509 400 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TYW1BQ6NUM6 668 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ZNF365Q70YC5 407 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ADGRA1Q86SQ6 560 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 IL23AQ9NPF7 189 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 COG5Q9UP83 839 aa11.31□□□□□ -0.6
SOX9-AS1-213ENST00000533996 PARP14Q460N5 1801 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SRGAP3O43295 1099 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 FGBP02675 491 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CST5P28325 142 aaPredicted RBP11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 USP5P45974 858 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 HIC1Q14526 733 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 PLS1Q14651 629 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 KCNA10Q16322 511 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CCDC158Q5M9N0 1113 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CCSAPQ6IQ19 270 aaPredicted RBP11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 PCSK9Q8NBP7 692 aaKnown RBP11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ZNF512BQ96KM6 892 aaPredicted RBP11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TANGO6Q9C0B7 1094 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 NKX2-4Q9H2Z4 354 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 EPHX3Q9H6B9 360 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ARVCFO00192 962 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CYP2E1P05181 493 aaPredicted RBP11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 GNAI3P08754 354 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 COPB2P35606 906 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ZNF792Q3KQV3 632 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 MMP19Q99542 508 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CNPY2Q9Y2B0 182 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 COL11A1P12107 1806 aaPredicted RBP11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CHD7Q9P2D1 2997 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SYNRGQ9UMZ2 1314 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TRANK1O15050 2925 aa11.29□□□□□ -0.6
SOX9-AS1-213ENST00000533996 A0A0U1RQG5 324 aaPredicted RBP11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 MAP3K7O43318 606 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TLL1O43897 1013 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 NUDT7P0C024 238 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 CYP7A1P22680 504 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SHMT1P34896 483 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 TFF2Q03403 129 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 KCTD2Q14681 263 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SEPT2Q15019 361 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ALYREFQ86V81 257 aaKnown RBP11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 RIOX2Q8IUF8 465 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SEZ6LQ9BYH1 1024 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 API5Q9BZZ5 524 aaKnown RBP11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 ADAMTS5Q9UNA0 930 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
SOX9-AS1-213ENST00000533996 LRRC37A2A6NM11 1700 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 E9PSI1 815 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 PI4K2BG5E9Z4 385 aa11.27□□□□□ -0.61
SOX9-AS1-213ENST00000533996 APBB1O00213 710 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms