RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 ZNF576Q9H609 170 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 PPP1R9AQ9ULJ8 1098 aa17.19■□□□□ 0.34
SHARPIN-208ENST00000533948 MYADML2A6NDP7 307 aa17.18■□□□□ 0.34
SHARPIN-208ENST00000533948 CHGBP05060 677 aa17.18■□□□□ 0.34
SHARPIN-208ENST00000533948 TJAP1Q5JTD0 557 aa17.18■□□□□ 0.34
SHARPIN-208ENST00000533948 C16orf86Q6ZW13 317 aa17.18■□□□□ 0.34
SHARPIN-208ENST00000533948 MSL3Q8N5Y2 521 aaKnown RBP17.18■□□□□ 0.34
SHARPIN-208ENST00000533948 TOX2Q96NM4 488 aa17.18■□□□□ 0.34
SHARPIN-208ENST00000533948 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.18■□□□□ 0.344e-7■■■□□ 18.7
SHARPIN-208ENST00000533948 SYNRGQ9UMZ2 1314 aa17.18■□□□□ 0.34
SHARPIN-208ENST00000533948 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 GRXCR1A8MXD5 290 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 ATP5JP18859 108 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 PBX2P40425 430 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 ACLYP53396 1101 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 MYO9BQ13459 2157 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 ANKRD33Q7Z3H0 272 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 REPS2Q8NFH8 660 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 PPM1EQ8WY54 764 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 TIFAQ96CG3 184 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 DDX11Q96FC9 970 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 STARD7Q9NQZ5 370 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 RAPGEFL1Q9UHV5 662 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 ZNF214Q9UL59 606 aaPredicted RBP17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 FAM184BQ9ULE4 1060 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 SLC4A4Q9Y6R1 1079 aa17.17■□□□□ 0.34
SHARPIN-208ENST00000533948 UBE3CQ15386 1083 aa17.16■□□□□ 0.34
SHARPIN-208ENST00000533948 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
SHARPIN-208ENST00000533948 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
SHARPIN-208ENST00000533948 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
SHARPIN-208ENST00000533948 MOXD2PA6NHM9 499 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 TNFRSF10AO00220 468 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 SNAI1O95863 264 aaPredicted RBP17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 TIMP1P01033 207 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 COL9A1P20849 921 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 KCNA10Q16322 511 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 CCSAPQ6IQ19 270 aaPredicted RBP17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 CCDC174Q6PII3 467 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 KLHDC9Q8NEP7 349 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 VTI1AQ96AJ9 217 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 HAUS7Q99871 368 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
SHARPIN-208ENST00000533948 ADCY6O43306 1168 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 SMARCA5O60264 1052 aaPredicted RBP17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 ZBED4O75132 1171 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 TMEM240Q5SV17 173 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 PRPF38AQ8NAV1 312 aaKnown RBP17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 TEX13BQ9BXU2 312 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 PBX4Q9BYU1 374 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 PRDM12Q9H4Q4 367 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 SPC25Q9HBM1 224 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 RIPK3Q9Y572 518 aa17.14■□□□□ 0.33
SHARPIN-208ENST00000533948 ACRP10323 421 aa17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 CSF2RAP15509 400 aa17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 SNRNP48Q6IEG0 339 aaKnown RBP17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 GLT1D1Q96MS3 346 aa17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 MCM3APO60318 1980 aa17.13■□□□□ 0.33
SHARPIN-208ENST00000533948 F5H6K3 240 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 DUSP11O75319 330 aaKnown RBP17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 KLRC3Q07444 240 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 MFSD5Q6N075 450 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 CCDC129Q6ZRS4 1044 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 PPP1R12CQ9BZL4 782 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 NYAP2Q9P242 653 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 ELP1O95163 1332 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 MROH7Q68CQ1 1323 aa17.12■□□□□ 0.33
SHARPIN-208ENST00000533948 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 C6orf222P0C671 652 aaPredicted RBP17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.331e-7■■■□□ 14.9
SHARPIN-208ENST00000533948 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 ADGRE1Q14246 886 aa17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 CPXCR1Q8N123 301 aa17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 GAS2L1Q99501 681 aaPredicted RBP17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 DCTPP1Q9H773 170 aa17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 CLIP2Q9UDT6 1046 aa17.11■□□□□ 0.33
SHARPIN-208ENST00000533948 GREB1LQ9C091 1923 aaPredicted RBP17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 DNAJC25-GNG10A0A024R161 153 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 ASGR1P07306 291 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 CDK7P50613 346 aa17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 RRP1P56182 461 aaKnown RBP17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 CCDC85BQ15834 202 aaPredicted RBP17.1■□□□□ 0.33
SHARPIN-208ENST00000533948 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms